Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2467 and DvMF_2468 are separated by 58 nucleotides DvMF_2468 and DvMF_2469 overlap by 4 nucleotides DvMF_2469 and DvMF_2470 are separated by 11 nucleotides
DvMF_2467: DvMF_2467 - hypothetical protein (RefSeq), at 3,112,109 to 3,112,639
_2467
DvMF_2468: DvMF_2468 - molybdopterin-containing oxidoreductase membrane anchor subunit (RefSeq), at 3,112,698 to 3,113,495
_2468
DvMF_2469: DvMF_2469 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 3,113,492 to 3,114,058
_2469
DvMF_2470: DvMF_2470 - molybdopterin oxidoreductase (RefSeq), at 3,114,070 to 3,116,325
_2470
Position (kb)
3113
3114
3115 Strain fitness (log2 ratio)
-1
0
1 at 3112.696 kb on + strand at 3113.082 kb on + strand, within DvMF_2468 at 3113.090 kb on - strand, within DvMF_2468 at 3113.350 kb on - strand, within DvMF_2468 at 3113.421 kb on + strand at 3113.475 kb on + strand at 3113.730 kb on + strand, within DvMF_2469 at 3113.829 kb on + strand, within DvMF_2469 at 3113.859 kb on - strand, within DvMF_2469 at 3113.912 kb on - strand, within DvMF_2469 at 3114.271 kb on - strand at 3114.342 kb on - strand, within DvMF_2470 at 3114.748 kb on + strand, within DvMF_2470 at 3114.878 kb on - strand, within DvMF_2470 at 3114.968 kb on + strand, within DvMF_2470 at 3115.013 kb on + strand, within DvMF_2470
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 3,112,696 + -0.6 3,113,082 + DvMF_2468 0.48 -0.6 3,113,090 - DvMF_2468 0.49 +0.2 3,113,350 - DvMF_2468 0.82 -0.9 3,113,421 + -0.2 3,113,475 + +0.4 3,113,730 + DvMF_2469 0.42 +1.2 3,113,829 + DvMF_2469 0.59 +1.0 3,113,859 - DvMF_2469 0.65 -0.2 3,113,912 - DvMF_2469 0.74 -0.2 3,114,271 - -0.6 3,114,342 - DvMF_2470 0.12 -0.3 3,114,748 + DvMF_2470 0.30 -0.9 3,114,878 - DvMF_2470 0.36 -0.4 3,114,968 + DvMF_2470 0.40 -1.0 3,115,013 + DvMF_2470 0.42 -0.3
Or see this region's nucleotide sequence