Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2257 and DvMF_2258 are separated by 205 nucleotides DvMF_2258 and DvMF_2259 are separated by 137 nucleotides DvMF_2259 and DvMF_2260 overlap by 4 nucleotides
DvMF_2257: DvMF_2257 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 2,835,882 to 2,837,693
_2257
DvMF_2258: DvMF_2258 - hypothetical protein (RefSeq), at 2,837,899 to 2,838,387
_2258
DvMF_2259: DvMF_2259 - ABC transporter related (RefSeq), at 2,838,525 to 2,839,349
_2259
DvMF_2260: DvMF_2260 - cobalamin synthesis protein P47K (RefSeq), at 2,839,346 to 2,840,125
_2260
Position (kb)
2837
2838
2839 Strain fitness (log2 ratio)
-2
-1
0
1 at 2836.999 kb on - strand, within DvMF_2257 at 2837.442 kb on + strand, within DvMF_2257 at 2837.492 kb on + strand, within DvMF_2257 at 2837.639 kb on + strand at 2837.647 kb on - strand at 2837.952 kb on + strand, within DvMF_2258 at 2838.549 kb on - strand at 2838.666 kb on - strand, within DvMF_2259 at 2838.740 kb on + strand, within DvMF_2259 at 2838.810 kb on + strand, within DvMF_2259 at 2838.994 kb on + strand, within DvMF_2259 at 2839.052 kb on + strand, within DvMF_2259 at 2839.052 kb on - strand, within DvMF_2259 at 2839.179 kb on + strand, within DvMF_2259 at 2839.187 kb on - strand, within DvMF_2259 at 2839.187 kb on - strand, within DvMF_2259 at 2839.384 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 2,836,999 - DvMF_2257 0.62 -0.1 2,837,442 + DvMF_2257 0.86 -0.4 2,837,492 + DvMF_2257 0.89 +0.3 2,837,639 + -0.1 2,837,647 - -0.8 2,837,952 + DvMF_2258 0.11 -1.3 2,838,549 - -0.6 2,838,666 - DvMF_2259 0.17 -0.6 2,838,740 + DvMF_2259 0.26 -0.5 2,838,810 + DvMF_2259 0.35 -0.1 2,838,994 + DvMF_2259 0.57 -0.4 2,839,052 + DvMF_2259 0.64 -1.9 2,839,052 - DvMF_2259 0.64 -0.0 2,839,179 + DvMF_2259 0.79 -0.7 2,839,187 - DvMF_2259 0.80 -0.4 2,839,187 - DvMF_2259 0.80 -0.2 2,839,384 + -0.2
Or see this region's nucleotide sequence