Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2254 and DvMF_2255 are separated by 71 nucleotides DvMF_2255 and DvMF_2256 are separated by 426 nucleotides DvMF_2256 and DvMF_2257 are separated by 325 nucleotides
DvMF_2254: DvMF_2254 - cobyrinic acid a,c-diamide synthase (RefSeq), at 2,832,792 to 2,834,408
_2254
DvMF_2255: DvMF_2255 - hypothetical protein (RefSeq), at 2,834,480 to 2,834,737
_2255
DvMF_2256: DvMF_2256 - transcriptional regulator, MucR family (RefSeq), at 2,835,164 to 2,835,556
_2256
DvMF_2257: DvMF_2257 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 2,835,882 to 2,837,693
_2257
Position (kb)
2835
2836 Strain fitness (log2 ratio)
-1
0
1 at 2834.437 kb on + strand at 2834.858 kb on + strand at 2835.181 kb on + strand at 2835.269 kb on - strand, within DvMF_2256 at 2835.484 kb on - strand, within DvMF_2256 at 2835.577 kb on - strand at 2836.118 kb on + strand, within DvMF_2257 at 2836.198 kb on + strand, within DvMF_2257 at 2836.231 kb on + strand, within DvMF_2257 at 2836.547 kb on - strand, within DvMF_2257 at 2836.552 kb on - strand, within DvMF_2257
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 2,834,437 + -0.4 2,834,858 + -0.2 2,835,181 + -1.3 2,835,269 - DvMF_2256 0.27 -0.8 2,835,484 - DvMF_2256 0.81 -0.4 2,835,577 - +0.2 2,836,118 + DvMF_2257 0.13 -0.4 2,836,198 + DvMF_2257 0.17 -0.4 2,836,231 + DvMF_2257 0.19 -0.1 2,836,547 - DvMF_2257 0.37 -0.0 2,836,552 - DvMF_2257 0.37 +0.6
Or see this region's nucleotide sequence