Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1978 and DvMF_1979 are separated by 103 nucleotides DvMF_1979 and DvMF_1980 are separated by 273 nucleotides DvMF_1980 and DvMF_1981 are separated by 510 nucleotides
DvMF_1978: DvMF_1978 - hypothetical protein (RefSeq), at 2,448,257 to 2,448,454
_1978
DvMF_1979: DvMF_1979 - hypothetical protein (RefSeq), at 2,448,558 to 2,449,097
_1979
DvMF_1980: DvMF_1980 - hypothetical protein (RefSeq), at 2,449,371 to 2,449,688
_1980
DvMF_1981: DvMF_1981 - Ferritin Dps family protein (RefSeq), at 2,450,199 to 2,450,798
_1981
Position (kb)
2449
2450 Strain fitness (log2 ratio)
-1
0
1 at 2448.515 kb on - strand at 2448.605 kb on + strand at 2448.821 kb on + strand, within DvMF_1979 at 2448.837 kb on - strand, within DvMF_1979 at 2449.024 kb on + strand, within DvMF_1979 at 2449.024 kb on + strand, within DvMF_1979 at 2449.034 kb on + strand, within DvMF_1979 at 2449.162 kb on + strand at 2449.202 kb on - strand at 2449.204 kb on + strand at 2449.610 kb on + strand, within DvMF_1980 at 2449.710 kb on - strand at 2449.909 kb on + strand at 2449.983 kb on + strand at 2450.266 kb on - strand, within DvMF_1981 at 2450.454 kb on - strand, within DvMF_1981 at 2450.506 kb on + strand, within DvMF_1981
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 2,448,515 - -0.3 2,448,605 + -0.2 2,448,821 + DvMF_1979 0.49 -0.4 2,448,837 - DvMF_1979 0.52 -0.9 2,449,024 + DvMF_1979 0.86 +0.4 2,449,024 + DvMF_1979 0.86 -0.3 2,449,034 + DvMF_1979 0.88 +0.0 2,449,162 + -0.1 2,449,202 - -0.5 2,449,204 + -0.4 2,449,610 + DvMF_1980 0.75 -1.1 2,449,710 - +0.1 2,449,909 + -0.2 2,449,983 + +0.0 2,450,266 - DvMF_1981 0.11 -0.9 2,450,454 - DvMF_1981 0.42 -0.2 2,450,506 + DvMF_1981 0.51 -0.9
Or see this region's nucleotide sequence