Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1852 and DvMF_1853 are separated by 191 nucleotides DvMF_1853 and DvMF_1854 are separated by 108 nucleotides
DvMF_1852: DvMF_1852 - glycosyl transferase family 2 (RefSeq), at 2,264,492 to 2,266,969
_1852
DvMF_1853: DvMF_1853 - glycosyl transferase group 1 (RefSeq), at 2,267,161 to 2,268,318
_1853
DvMF_1854: DvMF_1854 - NAD-dependent epimerase/dehydratase (RefSeq), at 2,268,427 to 2,269,359
_1854
Position (kb)
2267
2268
2269 Strain fitness (log2 ratio)
-1
0
1 at 2266.189 kb on + strand, within DvMF_1852 at 2266.311 kb on + strand, within DvMF_1852 at 2266.316 kb on + strand, within DvMF_1852 at 2266.424 kb on - strand, within DvMF_1852 at 2266.574 kb on + strand, within DvMF_1852 at 2266.598 kb on + strand, within DvMF_1852 at 2266.627 kb on + strand, within DvMF_1852 at 2266.689 kb on - strand, within DvMF_1852 at 2266.854 kb on - strand at 2266.928 kb on + strand at 2266.972 kb on + strand at 2267.082 kb on - strand at 2267.128 kb on - strand at 2267.317 kb on + strand, within DvMF_1853 at 2267.446 kb on - strand, within DvMF_1853 at 2267.679 kb on - strand, within DvMF_1853 at 2267.842 kb on - strand, within DvMF_1853 at 2267.916 kb on + strand, within DvMF_1853 at 2267.937 kb on - strand, within DvMF_1853 at 2268.015 kb on - strand, within DvMF_1853 at 2268.052 kb on - strand, within DvMF_1853 at 2268.057 kb on - strand, within DvMF_1853 at 2268.667 kb on - strand, within DvMF_1854 at 2268.837 kb on + strand, within DvMF_1854 at 2268.937 kb on + strand, within DvMF_1854 at 2269.043 kb on - strand, within DvMF_1854 at 2269.068 kb on + strand, within DvMF_1854 at 2269.143 kb on - strand, within DvMF_1854 at 2269.143 kb on - strand, within DvMF_1854
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 2,266,189 + DvMF_1852 0.68 +0.1 2,266,311 + DvMF_1852 0.73 -0.3 2,266,316 + DvMF_1852 0.74 +0.1 2,266,424 - DvMF_1852 0.78 -0.6 2,266,574 + DvMF_1852 0.84 +0.1 2,266,598 + DvMF_1852 0.85 -0.3 2,266,627 + DvMF_1852 0.86 -0.6 2,266,689 - DvMF_1852 0.89 -0.4 2,266,854 - -0.1 2,266,928 + +0.4 2,266,972 + -0.5 2,267,082 - -0.8 2,267,128 - -0.3 2,267,317 + DvMF_1853 0.13 -0.4 2,267,446 - DvMF_1853 0.25 +0.0 2,267,679 - DvMF_1853 0.45 -0.1 2,267,842 - DvMF_1853 0.59 -0.2 2,267,916 + DvMF_1853 0.65 -0.1 2,267,937 - DvMF_1853 0.67 -0.2 2,268,015 - DvMF_1853 0.74 -0.6 2,268,052 - DvMF_1853 0.77 -0.2 2,268,057 - DvMF_1853 0.77 -1.0 2,268,667 - DvMF_1854 0.26 -0.3 2,268,837 + DvMF_1854 0.44 +0.2 2,268,937 + DvMF_1854 0.55 -0.6 2,269,043 - DvMF_1854 0.66 -0.0 2,269,068 + DvMF_1854 0.69 -0.5 2,269,143 - DvMF_1854 0.77 -0.5 2,269,143 - DvMF_1854 0.77 -0.2
Or see this region's nucleotide sequence