Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1457 and DvMF_1458 are separated by 14 nucleotides DvMF_1458 and DvMF_1459 are separated by 85 nucleotides
DvMF_1457: DvMF_1457 - hypothetical protein (RefSeq), at 1,784,883 to 1,785,560
_1457
DvMF_1458: DvMF_1458 - multi-sensor signal transduction histidine kinase (RefSeq), at 1,785,575 to 1,788,112
_1458
DvMF_1459: DvMF_1459 - domain of unknown function DUF1731 (RefSeq), at 1,788,198 to 1,789,154
_1459
Position (kb)
1785
1786
1787
1788
1789 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1784.970 kb on + strand, within DvMF_1457 at 1785.118 kb on + strand, within DvMF_1457 at 1785.232 kb on - strand, within DvMF_1457 at 1785.739 kb on - strand at 1785.846 kb on + strand, within DvMF_1458 at 1786.024 kb on - strand, within DvMF_1458 at 1786.148 kb on - strand, within DvMF_1458 at 1786.283 kb on + strand, within DvMF_1458 at 1786.399 kb on - strand, within DvMF_1458 at 1787.201 kb on + strand, within DvMF_1458 at 1787.708 kb on + strand, within DvMF_1458 at 1787.724 kb on + strand, within DvMF_1458 at 1787.830 kb on - strand, within DvMF_1458 at 1787.872 kb on + strand at 1787.994 kb on - strand at 1788.260 kb on + strand at 1788.696 kb on + strand, within DvMF_1459 at 1788.709 kb on - strand, within DvMF_1459 at 1788.709 kb on - strand, within DvMF_1459 at 1789.006 kb on + strand, within DvMF_1459
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,784,970 + DvMF_1457 0.13 -0.2 1,785,118 + DvMF_1457 0.35 -0.6 1,785,232 - DvMF_1457 0.51 +1.0 1,785,739 - -0.3 1,785,846 + DvMF_1458 0.11 -1.0 1,786,024 - DvMF_1458 0.18 +0.8 1,786,148 - DvMF_1458 0.23 -3.9 1,786,283 + DvMF_1458 0.28 -1.1 1,786,399 - DvMF_1458 0.32 -1.8 1,787,201 + DvMF_1458 0.64 -1.0 1,787,708 + DvMF_1458 0.84 +0.4 1,787,724 + DvMF_1458 0.85 -0.9 1,787,830 - DvMF_1458 0.89 -1.0 1,787,872 + -1.2 1,787,994 - -1.5 1,788,260 + -0.3 1,788,696 + DvMF_1459 0.52 -0.4 1,788,709 - DvMF_1459 0.53 -0.2 1,788,709 - DvMF_1459 0.53 -0.3 1,789,006 + DvMF_1459 0.84 -0.1
Or see this region's nucleotide sequence