Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1384 and DvMF_1385 are separated by 278 nucleotides DvMF_1385 and DvMF_1386 are separated by 235 nucleotides DvMF_1386 and DvMF_1387 overlap by 29 nucleotides DvMF_1387 and DvMF_1388 are separated by 3 nucleotides
DvMF_1384: DvMF_1384 - hypothetical protein (RefSeq), at 1,693,864 to 1,694,442
_1384
DvMF_1385: DvMF_1385 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein (RefSeq), at 1,694,721 to 1,695,182
_1385
DvMF_1386: DvMF_1386 - ATP synthase protein I (RefSeq), at 1,695,418 to 1,695,693
_1386
DvMF_1387: DvMF_1387 - ATP synthase I (RefSeq), at 1,695,665 to 1,696,099
_1387
DvMF_1388: DvMF_1388 - ATP synthase F0, A subunit (RefSeq), at 1,696,103 to 1,696,804
_1388
Position (kb)
1695
1696 Strain fitness (log2 ratio)
-2
-1
0
1 at 1694.688 kb on - strand at 1694.821 kb on + strand, within DvMF_1385 at 1694.821 kb on + strand, within DvMF_1385 at 1694.821 kb on + strand, within DvMF_1385 at 1694.821 kb on + strand, within DvMF_1385 at 1694.871 kb on + strand, within DvMF_1385 at 1694.936 kb on + strand, within DvMF_1385 at 1694.981 kb on + strand, within DvMF_1385 at 1694.981 kb on + strand, within DvMF_1385 at 1695.101 kb on + strand, within DvMF_1385 at 1695.169 kb on - strand at 1695.212 kb on - strand at 1695.332 kb on - strand at 1695.524 kb on - strand, within DvMF_1386
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,694,688 - -0.4 1,694,821 + DvMF_1385 0.22 -0.3 1,694,821 + DvMF_1385 0.22 -0.8 1,694,821 + DvMF_1385 0.22 -0.0 1,694,821 + DvMF_1385 0.22 -0.2 1,694,871 + DvMF_1385 0.32 -0.0 1,694,936 + DvMF_1385 0.47 +0.9 1,694,981 + DvMF_1385 0.56 -0.3 1,694,981 + DvMF_1385 0.56 -0.4 1,695,101 + DvMF_1385 0.82 -0.8 1,695,169 - -0.0 1,695,212 - -0.3 1,695,332 - -0.9 1,695,524 - DvMF_1386 0.38 -1.8
Or see this region's nucleotide sequence