Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1196 and DvMF_1197 are separated by 309 nucleotides DvMF_1197 and DvMF_1198 are separated by 177 nucleotides DvMF_1198 and DvMF_1199 are separated by 421 nucleotides
DvMF_1196: DvMF_1196 - sulfur relay protein, TusE/DsrC/DsvC family (RefSeq), at 1,475,308 to 1,475,625
_1196
DvMF_1197: DvMF_1197 - hypothetical protein (RefSeq), at 1,475,935 to 1,476,207
_1197
DvMF_1198: DvMF_1198 - no description, at 1,476,385 to 1,476,585
_1198
DvMF_1199: DvMF_1199 - putative ABC transporter solute-binding protein (RefSeq), at 1,477,007 to 1,478,299
_1199
Position (kb) 1476
1477 Strain fitness (log2 ratio) -1
0
1 at 1476.022 kb on - strand, within DvMF_1197 at 1476.173 kb on + strand, within DvMF_1197 at 1476.491 kb on + strand, within DvMF_1198 at 1476.724 kb on + strand at 1476.872 kb on - strand at 1476.979 kb on + strand at 1477.301 kb on - strand, within DvMF_1199 at 1477.387 kb on + strand, within DvMF_1199 at 1477.459 kb on - strand, within DvMF_1199 at 1477.519 kb on - strand, within DvMF_1199
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,476,022 - DvMF_1197 0.32 -0.7 1,476,173 + DvMF_1197 0.87 -0.6 1,476,491 + DvMF_1198 0.53 -0.8 1,476,724 + -0.7 1,476,872 - -0.4 1,476,979 + -0.6 1,477,301 - DvMF_1199 0.23 +0.2 1,477,387 + DvMF_1199 0.29 -0.4 1,477,459 - DvMF_1199 0.35 -0.3 1,477,519 - DvMF_1199 0.40 -0.3
Or see this region's nucleotide sequence