Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0988 and DvMF_0989 are separated by 224 nucleotides DvMF_0989 and DvMF_0990 are separated by 292 nucleotides
DvMF_0988: DvMF_0988 - hydroxylamine reductase (RefSeq), at 1,200,225 to 1,201,844
_0988
DvMF_0989: DvMF_0989 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 1,202,069 to 1,202,950
_0989
DvMF_0990: DvMF_0990 - iron-containing alcohol dehydrogenase (RefSeq), at 1,203,243 to 1,204,403
_0990
Position (kb)
1202
1203 Strain fitness (log2 ratio)
-1
0
1 at 1201.365 kb on + strand, within DvMF_0988 at 1201.370 kb on + strand, within DvMF_0988 at 1201.433 kb on + strand, within DvMF_0988 at 1201.441 kb on - strand, within DvMF_0988 at 1201.521 kb on - strand, within DvMF_0988 at 1201.565 kb on + strand, within DvMF_0988 at 1202.068 kb on + strand at 1202.076 kb on - strand at 1202.140 kb on - strand at 1202.176 kb on + strand, within DvMF_0989 at 1202.176 kb on + strand, within DvMF_0989 at 1202.260 kb on + strand, within DvMF_0989 at 1202.356 kb on + strand, within DvMF_0989 at 1202.361 kb on + strand, within DvMF_0989 at 1202.548 kb on - strand, within DvMF_0989 at 1202.551 kb on - strand, within DvMF_0989 at 1202.707 kb on + strand, within DvMF_0989 at 1202.707 kb on + strand, within DvMF_0989 at 1203.077 kb on - strand at 1203.085 kb on - strand at 1203.152 kb on + strand at 1203.258 kb on - strand at 1203.512 kb on + strand, within DvMF_0990 at 1203.554 kb on - strand, within DvMF_0990 at 1203.554 kb on - strand, within DvMF_0990 at 1203.554 kb on - strand, within DvMF_0990 at 1203.556 kb on + strand, within DvMF_0990 at 1203.556 kb on + strand, within DvMF_0990 at 1203.596 kb on + strand, within DvMF_0990 at 1203.626 kb on + strand, within DvMF_0990 at 1203.634 kb on - strand, within DvMF_0990 at 1203.851 kb on + strand, within DvMF_0990 at 1203.852 kb on + strand, within DvMF_0990
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,201,365 + DvMF_0988 0.70 -0.3 1,201,370 + DvMF_0988 0.71 -0.4 1,201,433 + DvMF_0988 0.75 -0.4 1,201,441 - DvMF_0988 0.75 -0.4 1,201,521 - DvMF_0988 0.80 -0.2 1,201,565 + DvMF_0988 0.83 -0.4 1,202,068 + -0.1 1,202,076 - -0.3 1,202,140 - -0.6 1,202,176 + DvMF_0989 0.12 -0.6 1,202,176 + DvMF_0989 0.12 -0.8 1,202,260 + DvMF_0989 0.22 -1.0 1,202,356 + DvMF_0989 0.33 -0.6 1,202,361 + DvMF_0989 0.33 -0.4 1,202,548 - DvMF_0989 0.54 -0.6 1,202,551 - DvMF_0989 0.55 -1.1 1,202,707 + DvMF_0989 0.72 -0.6 1,202,707 + DvMF_0989 0.72 -0.7 1,203,077 - +0.1 1,203,085 - -0.3 1,203,152 + -0.7 1,203,258 - -0.4 1,203,512 + DvMF_0990 0.23 -0.6 1,203,554 - DvMF_0990 0.27 -0.3 1,203,554 - DvMF_0990 0.27 -0.3 1,203,554 - DvMF_0990 0.27 -0.4 1,203,556 + DvMF_0990 0.27 +0.2 1,203,556 + DvMF_0990 0.27 -0.4 1,203,596 + DvMF_0990 0.30 -0.2 1,203,626 + DvMF_0990 0.33 -0.1 1,203,634 - DvMF_0990 0.34 -0.2 1,203,851 + DvMF_0990 0.52 +0.0 1,203,852 + DvMF_0990 0.52 -0.3
Or see this region's nucleotide sequence