Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0854 and DvMF_0855 are separated by 2 nucleotides DvMF_0855 and DvMF_0856 are separated by 40 nucleotides DvMF_0856 and DvMF_0857 are separated by 320 nucleotides
DvMF_0854: DvMF_0854 - Mammalian cell entry related domain protein (RefSeq), at 1,032,199 to 1,032,645
_0854
DvMF_0855: DvMF_0855 - toluene tolerance family protein (RefSeq), at 1,032,648 to 1,033,352
_0855
DvMF_0856: DvMF_0856 - VacJ family lipoprotein (RefSeq), at 1,033,393 to 1,034,172
_0856
DvMF_0857: DvMF_0857 - Cupin 2 conserved barrel domain protein (RefSeq), at 1,034,493 to 1,034,810
_0857
Position (kb)
1033
1034
1035 Strain fitness (log2 ratio)
-1
0
1 at 1032.405 kb on + strand, within DvMF_0854 at 1032.461 kb on - strand, within DvMF_0854 at 1032.630 kb on + strand at 1032.707 kb on + strand at 1032.797 kb on - strand, within DvMF_0855 at 1032.852 kb on + strand, within DvMF_0855 at 1033.015 kb on + strand, within DvMF_0855 at 1033.286 kb on + strand at 1033.656 kb on - strand, within DvMF_0856 at 1033.683 kb on + strand, within DvMF_0856 at 1033.757 kb on + strand, within DvMF_0856 at 1034.523 kb on - strand at 1034.677 kb on - strand, within DvMF_0857 at 1034.779 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,032,405 + DvMF_0854 0.46 -1.1 1,032,461 - DvMF_0854 0.59 -0.7 1,032,630 + -0.7 1,032,707 + -0.9 1,032,797 - DvMF_0855 0.21 -1.0 1,032,852 + DvMF_0855 0.29 +0.3 1,033,015 + DvMF_0855 0.52 -1.1 1,033,286 + -0.7 1,033,656 - DvMF_0856 0.34 -0.2 1,033,683 + DvMF_0856 0.37 -1.3 1,033,757 + DvMF_0856 0.47 -0.8 1,034,523 - -0.5 1,034,677 - DvMF_0857 0.58 -0.3 1,034,779 - -0.4
Or see this region's nucleotide sequence