Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0851 and DvMF_0852 are separated by 160 nucleotides DvMF_0852 and DvMF_0853 are separated by 12 nucleotides DvMF_0853 and DvMF_0854 are separated by 108 nucleotides
DvMF_0851: DvMF_0851 - Sporulation domain protein (RefSeq), at 1,029,357 to 1,030,292
_0851
DvMF_0852: DvMF_0852 - protein of unknown function DUF140 (RefSeq), at 1,030,453 to 1,031,256
_0852
DvMF_0853: DvMF_0853 - ABC transporter related (RefSeq), at 1,031,269 to 1,032,090
_0853
DvMF_0854: DvMF_0854 - Mammalian cell entry related domain protein (RefSeq), at 1,032,199 to 1,032,645
_0854
Position (kb) 1030
1031
1032 Strain fitness (log2 ratio) -1
0
1 at 1029.724 kb on - strand, within DvMF_0851 at 1029.814 kb on - strand, within DvMF_0851 at 1030.190 kb on + strand, within DvMF_0851 at 1030.372 kb on - strand at 1030.476 kb on - strand at 1030.680 kb on - strand, within DvMF_0852 at 1030.988 kb on + strand, within DvMF_0852 at 1030.996 kb on - strand, within DvMF_0852 at 1031.040 kb on - strand, within DvMF_0852 at 1031.557 kb on - strand, within DvMF_0853 at 1031.562 kb on - strand, within DvMF_0853
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,029,724 - DvMF_0851 0.39 -0.2 1,029,814 - DvMF_0851 0.49 -0.9 1,030,190 + DvMF_0851 0.89 +0.3 1,030,372 - +0.0 1,030,476 - +0.1 1,030,680 - DvMF_0852 0.28 -1.7 1,030,988 + DvMF_0852 0.67 -1.5 1,030,996 - DvMF_0852 0.68 +0.1 1,031,040 - DvMF_0852 0.73 -0.6 1,031,557 - DvMF_0853 0.35 -0.9 1,031,562 - DvMF_0853 0.36 -0.9
Or see this region's nucleotide sequence