Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0839 and DvMF_0840 are separated by 195 nucleotides DvMF_0840 and DvMF_0841 are separated by 75 nucleotides
DvMF_0839: DvMF_0839 - Asparaginase (RefSeq), at 1,013,287 to 1,014,276
_0839
DvMF_0840: DvMF_0840 - glycogen branching enzyme (RefSeq), at 1,014,472 to 1,016,403
_0840
DvMF_0841: DvMF_0841 - glycogen/starch synthase, ADP-glucose type (RefSeq), at 1,016,479 to 1,017,945
_0841
Position (kb)
1014
1015
1016
1017 Strain fitness (log2 ratio)
-1
0
1 at 1014.018 kb on + strand, within DvMF_0839 at 1014.065 kb on + strand, within DvMF_0839 at 1014.080 kb on - strand, within DvMF_0839 at 1014.133 kb on - strand, within DvMF_0839 at 1014.698 kb on - strand, within DvMF_0840 at 1014.893 kb on + strand, within DvMF_0840 at 1014.893 kb on + strand, within DvMF_0840 at 1015.237 kb on + strand, within DvMF_0840 at 1015.502 kb on - strand, within DvMF_0840 at 1015.509 kb on + strand, within DvMF_0840 at 1015.530 kb on + strand, within DvMF_0840 at 1015.733 kb on + strand, within DvMF_0840 at 1015.765 kb on - strand, within DvMF_0840 at 1015.833 kb on + strand, within DvMF_0840 at 1016.069 kb on - strand, within DvMF_0840 at 1016.296 kb on - strand at 1016.338 kb on + strand at 1016.463 kb on - strand at 1016.670 kb on - strand, within DvMF_0841 at 1016.942 kb on - strand, within DvMF_0841 at 1016.951 kb on - strand, within DvMF_0841 at 1017.117 kb on - strand, within DvMF_0841 at 1017.397 kb on + strand, within DvMF_0841
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,014,018 + DvMF_0839 0.74 -0.1 1,014,065 + DvMF_0839 0.79 +0.1 1,014,080 - DvMF_0839 0.80 -0.6 1,014,133 - DvMF_0839 0.85 -0.3 1,014,698 - DvMF_0840 0.12 -1.5 1,014,893 + DvMF_0840 0.22 -0.7 1,014,893 + DvMF_0840 0.22 -0.9 1,015,237 + DvMF_0840 0.40 -0.1 1,015,502 - DvMF_0840 0.53 -0.6 1,015,509 + DvMF_0840 0.54 -0.8 1,015,530 + DvMF_0840 0.55 -1.6 1,015,733 + DvMF_0840 0.65 -0.4 1,015,765 - DvMF_0840 0.67 -0.6 1,015,833 + DvMF_0840 0.70 -0.1 1,016,069 - DvMF_0840 0.83 -1.1 1,016,296 - -0.4 1,016,338 + -1.0 1,016,463 - -0.2 1,016,670 - DvMF_0841 0.13 -0.4 1,016,942 - DvMF_0841 0.32 -0.5 1,016,951 - DvMF_0841 0.32 -0.4 1,017,117 - DvMF_0841 0.43 -0.6 1,017,397 + DvMF_0841 0.63 -0.5
Or see this region's nucleotide sequence