Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0235 and DvMF_0236 are separated by 219 nucleotides DvMF_0236 and DvMF_0237 are separated by 425 nucleotides
DvMF_0235: DvMF_0235 - Lysine exporter protein (LYSE/YGGA) (RefSeq), at 262,238 to 262,888
_0235
DvMF_0236: DvMF_0236 - peptidase M16 domain protein (RefSeq), at 263,108 to 265,921
_0236
DvMF_0237: DvMF_0237 - putative CheA signal transduction histidine kinase (RefSeq), at 266,347 to 268,356
_0237
Position (kb) 263
264
265
266 Strain fitness (log2 ratio) -2
-1
0
1 at 262.308 kb on + strand, within DvMF_0235 at 262.527 kb on + strand, within DvMF_0235 at 262.670 kb on + strand, within DvMF_0235 at 262.963 kb on - strand at 263.007 kb on + strand at 263.014 kb on + strand at 263.114 kb on - strand at 263.196 kb on - strand at 263.554 kb on + strand, within DvMF_0236 at 263.718 kb on - strand, within DvMF_0236 at 263.739 kb on + strand, within DvMF_0236 at 263.806 kb on + strand, within DvMF_0236 at 263.822 kb on + strand, within DvMF_0236 at 263.843 kb on + strand, within DvMF_0236 at 263.910 kb on + strand, within DvMF_0236 at 264.299 kb on - strand, within DvMF_0236 at 264.494 kb on - strand, within DvMF_0236 at 264.738 kb on - strand, within DvMF_0236 at 265.407 kb on - strand, within DvMF_0236 at 265.676 kb on + strand at 265.676 kb on + strand at 265.903 kb on + strand at 266.177 kb on + strand at 266.345 kb on - strand at 266.447 kb on + strand at 266.465 kb on - strand at 266.787 kb on + strand, within DvMF_0237 at 266.892 kb on + strand, within DvMF_0237
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 262,308 + DvMF_0235 0.11 -0.1 262,527 + DvMF_0235 0.44 -0.6 262,670 + DvMF_0235 0.66 -0.3 262,963 - -0.3 263,007 + -0.2 263,014 + -0.5 263,114 - -0.5 263,196 - -1.6 263,554 + DvMF_0236 0.16 -0.2 263,718 - DvMF_0236 0.22 -1.2 263,739 + DvMF_0236 0.22 -1.1 263,806 + DvMF_0236 0.25 -1.8 263,822 + DvMF_0236 0.25 -1.2 263,843 + DvMF_0236 0.26 -0.6 263,910 + DvMF_0236 0.29 -0.9 264,299 - DvMF_0236 0.42 -0.7 264,494 - DvMF_0236 0.49 -1.2 264,738 - DvMF_0236 0.58 -0.9 265,407 - DvMF_0236 0.82 -0.6 265,676 + -2.1 265,676 + -1.2 265,903 + -1.3 266,177 + -0.3 266,345 - -0.6 266,447 + -0.2 266,465 - -0.1 266,787 + DvMF_0237 0.22 -0.5 266,892 + DvMF_0237 0.27 -0.4
Or see this region's nucleotide sequence