Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4126
Experiment: Chloramphenicol 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.0001 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 4,958,518 | - | -0.6 | |||
| 4,958,576 | - | Shewana3_4126 | 0.15 | +0.1 | |
| 4,958,753 | - | Shewana3_4126 | 0.38 | +0.9 | |
| 4,958,821 | - | Shewana3_4126 | 0.47 | +1.3 | |
| 4,958,872 | - | Shewana3_4126 | 0.53 | +0.6 | |
| 4,958,879 | - | Shewana3_4126 | 0.54 | +0.4 | |
| 4,959,125 | - | Shewana3_4126 | 0.86 | +0.4 | |
| 4,959,160 | - | +0.9 | |||
| 4,959,587 | - | +0.2 | |||
| 4,959,635 | - | +0.7 | |||
| 4,959,721 | - | Shewana3_4127 | 0.14 | +0.3 | |
| 4,960,017 | - | Shewana3_4127 | 0.28 | +0.8 | |
| 4,960,112 | + | Shewana3_4127 | 0.32 | -1.9 |
Or see this region's nucleotide sequence