Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4046

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
4,860,433	+		Shewana3_4045	0.69	-0.7
4,860,463	+		Shewana3_4045	0.70	-0.7
4,860,463	-		Shewana3_4045	0.70	-5.3
4,860,594	-		Shewana3_4045	0.74	-6.6
4,860,891	+		Shewana3_4045	0.84	-3.6
4,860,929	-		Shewana3_4045	0.85	-5.3
4,860,984	-		Shewana3_4045	0.87	-5.6
4,861,072	+		Shewana3_4045	0.90	-2.5
4,861,247	+				-0.2
4,861,259	+				-4.4
4,861,297	-				-4.5
4,861,326	-				-4.9
4,861,360	-				-7.2
4,861,400	+				-1.7
4,861,408	-				-7.1
4,861,442	-				-3.6
4,861,667	+		Shewana3_4046	0.23	-3.5
4,861,701	+		Shewana3_4046	0.26	-4.2
4,861,737	+		Shewana3_4046	0.29	-5.2
4,861,806	-		Shewana3_4046	0.35	-5.3
4,861,806	-		Shewana3_4046	0.35	-5.7
4,861,833	+		Shewana3_4046	0.37	-3.4
4,861,946	-		Shewana3_4046	0.47	-4.9
4,861,946	-		Shewana3_4046	0.47	-5.0
4,862,191	-		Shewana3_4046	0.68	-5.8
4,862,250	-		Shewana3_4046	0.73	-5.6
4,862,363	+		Shewana3_4046	0.83	-0.7
4,862,416	-		Shewana3_4046	0.88	-2.7
4,862,439	-		Shewana3_4046	0.90	-5.0
4,862,475	-				-5.0
4,862,485	-				-5.6
4,862,485	-				-4.9
4,862,485	-				-5.7
4,862,509	+				-4.3
4,862,514	+				-4.4
4,862,604	+				-2.6
4,862,633	+				-4.5
4,862,660	+				-2.2
4,862,703	-				-3.1
4,862,805	-				-3.2
4,862,805	-				-3.5
4,862,864	+				-1.6
4,862,890	-				-1.9
4,863,103	+				-5.1
4,863,115	+				-3.1
4,863,164	+				-3.6
4,863,172	-				-3.1
4,863,172	-				-3.5
4,863,172	-				-4.1
4,863,332	+				-0.1
4,863,335	-				+0.3
4,863,335	-				-0.5
4,863,399	-				+0.3
4,863,514	+		Shewana3_4047	0.15	+0.1
4,863,515	+		Shewana3_4047	0.16	+0.3
4,863,515	+		Shewana3_4047	0.16	+1.2
4,863,523	-		Shewana3_4047	0.17	+0.3