Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4045

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
4,857,588	-		Shewana3_4043	0.26	-0.0
4,857,636	-		Shewana3_4043	0.42	+0.2
4,857,636	-		Shewana3_4043	0.42	+0.1
4,857,705	+		Shewana3_4043	0.65	-0.5
4,857,823	-				-0.3
4,857,909	-		Shewana3_4044	0.17	-0.4
4,858,048	+		Shewana3_4044	0.64	-0.5
4,858,110	-		Shewana3_4044	0.85	-0.4
4,858,347	-				-3.7
4,858,434	-				-6.0
4,858,610	+		Shewana3_4045	0.11	-1.3
4,858,719	+		Shewana3_4045	0.15	-2.9
4,858,727	-		Shewana3_4045	0.15	-5.0
4,858,727	-		Shewana3_4045	0.15	-4.0
4,858,727	-		Shewana3_4045	0.15	-5.5
4,858,727	-		Shewana3_4045	0.15	-5.8
4,858,740	-		Shewana3_4045	0.15	-5.0
4,858,869	-		Shewana3_4045	0.19	-4.1
4,858,949	+		Shewana3_4045	0.22	+0.3
4,858,968	-		Shewana3_4045	0.22	-6.2
4,859,178	-		Shewana3_4045	0.29	-5.1
4,859,547	-		Shewana3_4045	0.41	-4.7
4,860,346	+		Shewana3_4045	0.66	+0.3
4,860,433	+		Shewana3_4045	0.69	-0.7
4,860,463	+		Shewana3_4045	0.70	-0.7
4,860,463	-		Shewana3_4045	0.70	-5.3
4,860,594	-		Shewana3_4045	0.74	-6.6
4,860,891	+		Shewana3_4045	0.84	-3.6
4,860,929	-		Shewana3_4045	0.85	-5.3
4,860,984	-		Shewana3_4045	0.87	-5.6
4,861,072	+		Shewana3_4045	0.90	-2.5
4,861,247	+				-0.2
4,861,259	+				-4.4
4,861,297	-				-4.5
4,861,326	-				-4.9
4,861,360	-				-7.2
4,861,400	+				-1.7
4,861,408	-				-7.1
4,861,442	-				-3.6
4,861,667	+		Shewana3_4046	0.23	-3.5
4,861,701	+		Shewana3_4046	0.26	-4.2
4,861,737	+		Shewana3_4046	0.29	-5.2
4,861,806	-		Shewana3_4046	0.35	-5.3
4,861,806	-		Shewana3_4046	0.35	-5.7
4,861,833	+		Shewana3_4046	0.37	-3.4
4,861,946	-		Shewana3_4046	0.47	-4.9
4,861,946	-		Shewana3_4046	0.47	-5.0
4,862,191	-		Shewana3_4046	0.68	-5.8
4,862,250	-		Shewana3_4046	0.73	-5.6
4,862,363	+		Shewana3_4046	0.83	-0.7