Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4023

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
4,832,351	-				-0.2
4,832,409	+				-0.4
4,832,409	+				-1.3
4,832,409	+				-1.4
4,832,420	+				-0.4
4,832,464	-				+0.1
4,832,468	+				-0.3
4,832,498	+				-0.7
4,832,498	+				-1.0
4,832,498	+				-1.5
4,832,498	+				-0.2
4,832,506	-				+0.0
4,832,506	-				+0.2
4,832,506	-				+0.8
4,832,521	-				+0.7
4,832,521	-				+0.7
4,832,570	-				+2.0
4,832,589	-				-0.3
4,832,598	+				-0.6
4,832,598	+				-3.1
4,832,598	+				+1.8
4,832,598	+				-1.5
4,832,599	+				+0.8
4,832,599	+				-2.6
4,832,599	-				-0.6
4,832,606	-				+0.2
4,832,606	-				+1.2
4,832,606	-				-0.2
4,832,606	-				+0.0
4,832,607	-				+0.7
4,832,610	+				-0.8
4,832,615	+				+0.8
4,832,618	-				+0.8
4,832,618	-				+0.2
4,832,624	-				-1.4
4,832,654	+				-0.8
4,832,664	+				-2.1
4,832,664	-				+0.1
4,832,690	+				-0.5
4,832,692	+				-0.3
4,832,698	-				+0.3
4,832,700	+				-1.0
4,832,700	+				-0.8
4,832,700	-				+0.3
4,832,702	+				+1.8
4,832,708	-				+0.2
4,832,708	-				-0.3
4,832,708	-				+0.8
4,832,708	-				+0.4
4,832,715	-				-0.4
4,832,725	-				+0.6
4,832,726	+				+0.8
4,832,744	-				+0.1
4,832,758	-				+1.1
4,832,782	-				+0.4
4,832,802	+				-2.2
4,832,802	+				-0.5
4,832,810	-				+0.4
4,832,810	-				+0.4
4,832,846	+				-2.4
4,832,855	-				-1.9
4,832,872	-				+0.3
4,832,881	-				+0.1
4,832,956	+				-1.5
4,832,961	+				-1.0
4,832,961	+				-0.8
4,832,963	-				-0.3
4,832,964	-				+0.6
4,832,964	-				-0.1
4,832,964	-				+0.3
4,832,969	-				+0.3
4,832,970	+				-1.1
4,832,974	-				+0.4
4,833,019	+				-0.8
4,833,027	-				-0.6
4,833,027	-				+0.0
4,833,032	-				-0.2
4,833,037	-				+0.6
4,833,041	+				-1.3
4,833,041	+				-0.1
4,833,041	+				+0.1
4,833,041	+				-0.3
4,833,050	-				+0.2
4,833,075	+				+0.4
4,833,133	+				-0.3
4,833,133	+				-0.2
4,833,133	+				+0.1
4,833,133	+				+0.2
4,833,133	+				-0.4
4,833,133	+				+0.3
4,833,133	+				-0.1
4,833,133	+				-1.0
4,833,133	+				+0.6
4,833,141	-				-0.7
4,833,141	-				-1.3
4,833,141	-				+0.4
4,833,141	-				-0.6
4,833,141	-				-0.0
4,833,141	-				+0.4
4,833,141	-				-0.2
4,833,141	-				+0.4
4,833,141	-				+0.3
4,833,141	-				-0.2
4,833,141	-				+0.1
4,833,141	-				-0.5
4,833,141	-				+0.1
4,833,141	-				+0.2
4,833,141	-				-0.1
4,833,141	-				+0.2
4,833,204	-				-0.3
4,833,216	-				-0.5
4,833,272	+				-1.3
4,833,276	+				-0.0
4,833,281	+				-0.3
4,833,289	-				+0.5
4,833,363	-				+0.1
4,833,363	-				+0.3
4,833,363	-				+0.2
4,833,363	-				-0.0
4,833,373	+				-1.0
4,833,373	+				+0.8
4,833,373	+				+0.6
4,833,381	-				+0.3
4,833,381	-				+0.6
4,833,383	+				+0.1
4,833,396	+				-0.8
4,833,403	-				+0.1
4,833,413	-				+1.3
4,833,443	-		Shewana3_4023	0.10	+0.7
4,833,496	+		Shewana3_4023	0.16	-0.1
4,833,504	-		Shewana3_4023	0.17	+0.1
4,833,520	+		Shewana3_4023	0.19	-0.1
4,833,601	+		Shewana3_4023	0.27	-0.4
4,833,601	+		Shewana3_4023	0.27	-0.2
4,833,601	+		Shewana3_4023	0.27	+0.3
4,833,609	-		Shewana3_4023	0.28	+0.1
4,833,670	-		Shewana3_4023	0.34	+0.4
4,833,725	+		Shewana3_4023	0.40	-0.0
4,833,725	+		Shewana3_4023	0.40	-0.2
4,833,766	-		Shewana3_4023	0.45	+0.3
4,833,784	-		Shewana3_4023	0.46	+0.3
4,833,852	+		Shewana3_4023	0.54	+0.7
4,833,883	-		Shewana3_4023	0.57	+0.8
4,833,950	+		Shewana3_4023	0.64	+0.0
4,833,990	-		Shewana3_4023	0.68	+0.0
4,834,046	+		Shewana3_4023	0.74	+0.2
4,834,065	-		Shewana3_4023	0.76	+0.8
4,834,076	-		Shewana3_4023	0.77	+0.0
4,834,100	-		Shewana3_4023	0.80	-1.0
4,834,133	+		Shewana3_4023	0.83	-0.2
4,834,133	+		Shewana3_4023	0.83	+0.4
4,834,141	-		Shewana3_4023	0.84	+0.4
4,834,236	+				-1.0
4,834,253	-				-0.2
4,834,328	+				-0.2
4,834,328	+				+0.1
4,834,336	-				+0.1
4,834,421	+				-0.5
4,834,429	+				+0.0
4,834,453	+				-0.3
4,834,461	+				+0.1
4,834,607	-				-0.1
4,834,685	-				-0.2
4,834,784	+		Shewana3_4024	0.42	-0.2
4,834,802	-		Shewana3_4024	0.48	-0.5
4,834,807	-		Shewana3_4024	0.50	+0.0
4,834,827	+		Shewana3_4024	0.56	-0.3
4,834,853	+		Shewana3_4024	0.65	-0.1
4,834,966	+				-0.0
4,835,027	+				-0.3
4,835,027	+				-0.2
4,835,027	+				-0.4
4,835,032	+		Shewana3_4025	0.10	+0.0
4,835,032	+		Shewana3_4025	0.10	-0.4
4,835,037	+		Shewana3_4025	0.11	-0.3
4,835,144	-		Shewana3_4025	0.27	-0.5
4,835,183	+		Shewana3_4025	0.32	-0.0
4,835,258	+		Shewana3_4025	0.43	-0.0
4,835,259	-		Shewana3_4025	0.44	-0.5