Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4002

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
4,803,585	+		Shewana3_4001	0.34	-0.3
4,803,675	+		Shewana3_4001	0.40	+0.1
4,803,709	+		Shewana3_4001	0.43	+0.0
4,803,761	-		Shewana3_4001	0.47	-0.6
4,803,769	+		Shewana3_4001	0.47	-1.1
4,803,777	-		Shewana3_4001	0.48	-0.8
4,804,192	+		Shewana3_4001	0.78	-0.7
4,804,195	+		Shewana3_4001	0.78	-0.6
4,804,203	-		Shewana3_4001	0.79	-0.1
4,804,294	+		Shewana3_4001	0.86	-1.2
4,804,302	-		Shewana3_4001	0.86	-1.1
4,804,302	-		Shewana3_4001	0.86	-0.6
4,804,395	-				-1.4
4,804,400	-				-0.1
4,804,400	-				-0.4
4,804,437	+				-0.9
4,804,445	-				-1.0
4,804,606	-				-0.6
4,804,729	-				-0.6
4,804,738	+				-0.1
4,804,834	-		Shewana3_4002	0.14	-0.9
4,804,863	-		Shewana3_4002	0.15	-0.0
4,804,959	+		Shewana3_4002	0.20	-0.9
4,805,115	+		Shewana3_4002	0.28	+0.3
4,805,262	+		Shewana3_4002	0.36	-0.5
4,805,271	+		Shewana3_4002	0.36	+0.6
4,805,390	+		Shewana3_4002	0.42	-1.4
4,805,390	+		Shewana3_4002	0.42	-0.3
4,805,550	+		Shewana3_4002	0.51	-1.5
4,805,602	+		Shewana3_4002	0.53	-0.1
4,805,710	-		Shewana3_4002	0.59	-0.6
4,805,750	+		Shewana3_4002	0.61	-0.8
4,805,811	-		Shewana3_4002	0.64	+0.1
4,806,108	-		Shewana3_4002	0.80	-0.8
4,806,127	+		Shewana3_4002	0.80	-0.1
4,806,179	-		Shewana3_4002	0.83	-2.3
4,806,337	+				+0.2
4,806,452	+				-0.0
4,806,452	+				+0.5
4,806,452	+				+0.4
4,806,460	-				-0.5
4,806,460	-				-1.3
4,806,460	-				-1.0
4,806,505	+				+0.3
4,806,618	-				-0.5
4,806,618	-				-0.1
4,806,625	-				+0.6
4,807,230	+				-0.2
4,807,230	+				-0.7
4,807,453	-				+0.1
4,807,457	+				-0.3
4,807,464	+				+0.1
4,807,466	-				+0.5
4,807,466	-				+0.3
4,807,478	-				+0.1