Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3999

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
4,800,551	-		Shewana3_3998	0.11	-0.3
4,800,551	-		Shewana3_3998	0.11	+0.3
4,800,581	+		Shewana3_3998	0.14	-0.2
4,800,608	+		Shewana3_3998	0.17	+0.4
4,800,659	+		Shewana3_3998	0.23	-0.7
4,800,667	-		Shewana3_3998	0.23	+0.0
4,800,751	+		Shewana3_3998	0.33	-1.1
4,800,770	+		Shewana3_3998	0.35	-0.3
4,800,778	-		Shewana3_3998	0.36	+1.5
4,800,937	-		Shewana3_3998	0.53	+0.3
4,801,106	-		Shewana3_3998	0.72	-0.0
4,801,165	-		Shewana3_3998	0.79	+0.0
4,801,189	+		Shewana3_3998	0.81	-0.8
4,801,407	+				-3.1
4,801,553	-		Shewana3_3999	0.26	-2.1
4,801,568	+		Shewana3_3999	0.28	-0.1
4,801,570	-		Shewana3_3999	0.28	-1.1
4,801,582	-		Shewana3_3999	0.30	-0.2
4,801,656	+		Shewana3_3999	0.42	-0.7
4,801,664	-		Shewana3_3999	0.43	-0.6
4,801,688	-		Shewana3_3999	0.46	+0.8
4,801,746	+		Shewana3_3999	0.55	-0.6
4,801,757	+		Shewana3_3999	0.57	-0.3
4,801,757	+		Shewana3_3999	0.57	+0.2
4,801,797	-		Shewana3_3999	0.63	-0.7
4,801,839	+		Shewana3_3999	0.69	-0.2
4,801,839	+		Shewana3_3999	0.69	+0.3
4,801,839	+		Shewana3_3999	0.69	+0.2
4,801,839	+		Shewana3_3999	0.69	+0.3
4,801,847	-		Shewana3_3999	0.70	-1.4
4,801,847	-		Shewana3_3999	0.70	-0.5
4,801,847	-		Shewana3_3999	0.70	-0.1
4,801,847	-		Shewana3_3999	0.70	-0.6
4,801,942	+		Shewana3_3999	0.85	-1.7
4,801,942	+		Shewana3_3999	0.85	-0.4
4,801,965	-		Shewana3_3999	0.88	+0.4
4,802,098	-				+0.4
4,802,146	+				-0.1
4,802,326	-		Shewana3_4000	0.26	+0.3
4,802,371	+		Shewana3_4000	0.30	-0.1
4,802,493	-		Shewana3_4000	0.42	+0.1
4,802,565	+		Shewana3_4000	0.49	-0.7
4,802,596	+		Shewana3_4000	0.52	-0.5
4,802,632	+		Shewana3_4000	0.55	-1.2
4,802,680	+		Shewana3_4000	0.60	+0.6
4,802,815	+		Shewana3_4000	0.73	-0.3