Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3941

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
4,737,051	+		Shewana3_3940	0.42	-0.5
4,737,070	+		Shewana3_3940	0.44	-0.9
4,737,088	+		Shewana3_3940	0.45	+0.9
4,737,088	+		Shewana3_3940	0.45	+1.2
4,737,088	+		Shewana3_3940	0.45	-0.0
4,737,189	+		Shewana3_3940	0.53	+0.0
4,737,551	+		Shewana3_3940	0.80	-2.5
4,737,709	+				-0.7
4,737,717	-				+0.0
4,737,727	-				+0.2
4,737,735	-				-1.2
4,737,735	-				+0.6
4,737,745	+				-1.7
4,737,750	+				-0.3
4,737,758	-				-0.4
4,737,880	+				-0.1
4,737,979	+				+0.1
4,737,995	+				+0.4
4,738,071	+				+0.3
4,738,118	+		Shewana3_3941	0.11	-0.6
4,738,162	-		Shewana3_3941	0.15	+0.7
4,738,247	+		Shewana3_3941	0.21	+0.1
4,738,327	+		Shewana3_3941	0.26	-0.2
4,738,359	-		Shewana3_3941	0.29	+0.4
4,738,595	+		Shewana3_3941	0.45	+0.3
4,738,600	+		Shewana3_3941	0.46	+0.2
4,738,603	-		Shewana3_3941	0.46	-0.1
4,738,682	-		Shewana3_3941	0.51	-0.2
4,739,027	+		Shewana3_3941	0.76	-0.4
4,739,226	-		Shewana3_3941	0.90	+0.3
4,739,226	-		Shewana3_3941	0.90	+0.6
4,739,243	-				+0.2
4,739,331	-				-0.4
4,739,358	+				+1.5
4,739,425	-				-1.1
4,739,488	-				-2.4
4,739,521	+				+0.0
4,739,565	+				+0.8
4,739,618	-				-0.6
4,739,655	+				-1.1
4,739,724	+				-1.6
4,739,821	-		Shewana3_3942	0.13	+0.8
4,739,850	+		Shewana3_3942	0.16	-1.3
4,739,850	+		Shewana3_3942	0.16	-0.4
4,739,858	-		Shewana3_3942	0.17	+0.2
4,739,858	-		Shewana3_3942	0.17	-0.5
4,739,964	+		Shewana3_3942	0.28	-0.3
4,740,014	+		Shewana3_3942	0.33	-0.6
4,740,014	+		Shewana3_3942	0.33	-1.2
4,740,103	+		Shewana3_3942	0.42	-1.3
4,740,117	+		Shewana3_3942	0.43	-0.2