Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3877

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
4,655,545	+		Shewana3_3876	0.33	+0.6
4,655,558	+		Shewana3_3876	0.34	+0.2
4,655,577	+		Shewana3_3876	0.35	-0.1
4,655,599	+		Shewana3_3876	0.37	+0.9
4,655,650	-		Shewana3_3876	0.41	+0.3
4,655,658	-		Shewana3_3876	0.42	+0.5
4,655,766	+		Shewana3_3876	0.51	+0.2
4,655,771	+		Shewana3_3876	0.51	+0.5
4,655,876	+		Shewana3_3876	0.60	+0.8
4,655,876	+		Shewana3_3876	0.60	+0.4
4,655,876	+		Shewana3_3876	0.60	+0.1
4,655,876	+		Shewana3_3876	0.60	+1.9
4,655,876	+		Shewana3_3876	0.60	+0.5
4,655,876	+		Shewana3_3876	0.60	+0.3
4,655,884	-		Shewana3_3876	0.61	-0.2
4,655,884	-		Shewana3_3876	0.61	+0.9
4,655,884	-		Shewana3_3876	0.61	+0.0
4,655,884	-		Shewana3_3876	0.61	+0.4
4,656,179	-		Shewana3_3876	0.85	-1.8
4,656,499	+				-1.2
4,656,528	-				+0.1
4,656,545	+				+0.7
4,656,545	+				+0.3
4,656,553	-				-0.6
4,656,553	-				-0.4
4,656,609	+				-0.1
4,656,617	-				-0.6
4,656,757	-		Shewana3_3877	0.13	+0.0
4,656,775	+		Shewana3_3877	0.14	-0.8
4,656,840	-		Shewana3_3877	0.18	-1.7
4,656,917	-		Shewana3_3877	0.23	+0.1
4,656,971	+		Shewana3_3877	0.26	-1.0
4,657,004	+		Shewana3_3877	0.28	-0.9
4,657,205	-		Shewana3_3877	0.41	-0.3
4,657,248	+		Shewana3_3877	0.43	-1.1
4,657,284	-		Shewana3_3877	0.45	+0.1
4,657,300	-		Shewana3_3877	0.46	-0.6
4,657,409	+		Shewana3_3877	0.53	-0.8
4,657,424	-		Shewana3_3877	0.54	-0.7
4,657,446	-		Shewana3_3877	0.55	-0.1
4,657,486	-		Shewana3_3877	0.58	+0.1
4,657,607	-		Shewana3_3877	0.65	-0.4
4,657,668	-		Shewana3_3877	0.69	-0.4
4,657,883	+		Shewana3_3877	0.82	+0.2
4,657,994	-		Shewana3_3877	0.89	+0.2
4,658,118	-				+0.7
4,658,133	+				-0.0
4,658,452	+		Shewana3_3878	0.28	-0.5
4,658,470	+		Shewana3_3878	0.31	-0.0
4,658,484	-		Shewana3_3878	0.34	-0.1
4,658,551	+		Shewana3_3878	0.47	-1.1
4,658,871	+				+0.2