Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3862

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
4,637,447	+				-1.1
4,637,448	-				-2.1
4,637,460	+				-1.4
4,637,460	+				-3.1
4,637,460	+				-0.5
4,637,532	-		Shewana3_3861	0.16	-1.8
4,637,657	+		Shewana3_3861	0.29	-1.5
4,637,672	-		Shewana3_3861	0.31	-2.8
4,637,731	+		Shewana3_3861	0.37	-2.1
4,637,758	-		Shewana3_3861	0.40	-1.7
4,637,798	-		Shewana3_3861	0.44	-1.4
4,637,798	-		Shewana3_3861	0.44	+1.9
4,637,859	+		Shewana3_3861	0.50	-0.8
4,637,859	+		Shewana3_3861	0.50	+0.3
4,637,859	+				+1.9
4,637,859	+		Shewana3_3861	0.50	-0.7
4,637,867	-		Shewana3_3861	0.51	-1.8
4,637,867	-		Shewana3_3861	0.51	-0.6
4,637,886	-		Shewana3_3861	0.53	+0.4
4,637,911	+		Shewana3_3861	0.56	+1.9
4,637,919	-		Shewana3_3861	0.56	-1.7
4,637,919	-		Shewana3_3861	0.56	+0.9
4,637,924	+		Shewana3_3861	0.57	-2.1
4,637,933	-		Shewana3_3861	0.58	+0.5
4,638,005	-		Shewana3_3861	0.65	-0.2
4,638,115	+		Shewana3_3861	0.77	-0.6
4,638,260	+				-0.5
4,638,260	-				-1.1
4,638,268	-				-0.6
4,638,268	-				-0.8
4,638,268	-				-1.0
4,638,324	+				-1.0
4,638,335	-				-1.1
4,638,367	+				-0.3
4,638,434	-				-1.2
4,638,508	-				+0.4
4,638,523	-				+0.1
4,638,552	+				+0.9
4,638,703	-		Shewana3_3862	0.17	+0.0
4,638,711	+		Shewana3_3862	0.17	-0.9
4,638,719	-		Shewana3_3862	0.18	-0.0
4,638,724	+		Shewana3_3862	0.18	-1.0
4,638,738	+		Shewana3_3862	0.19	-0.9
4,638,738	+		Shewana3_3862	0.19	-0.7
4,638,751	-		Shewana3_3862	0.19	+0.4
4,638,794	+		Shewana3_3862	0.22	-0.9
4,638,900	-		Shewana3_3862	0.27	-0.6
4,638,949	+		Shewana3_3862	0.30	-0.8
4,639,034	-		Shewana3_3862	0.35	-1.2
4,639,125	-		Shewana3_3862	0.39	-1.2
4,639,262	+		Shewana3_3862	0.47	+0.5
4,639,262	+		Shewana3_3862	0.47	-0.5
4,639,284	-		Shewana3_3862	0.48	-0.1
4,639,302	+		Shewana3_3862	0.49	-2.2
4,639,302	+		Shewana3_3862	0.49	-0.3
4,639,310	-		Shewana3_3862	0.49	-2.5
4,639,310	-		Shewana3_3862	0.49	-2.2
4,639,339	-		Shewana3_3862	0.51	-0.2
4,639,461	-		Shewana3_3862	0.58	-1.1
4,639,566	+		Shewana3_3862	0.63	-0.1
4,639,566	+		Shewana3_3862	0.63	-1.2
4,639,573	+		Shewana3_3862	0.64	-2.5
4,639,656	-		Shewana3_3862	0.68	-1.4
4,639,658	+		Shewana3_3862	0.68	-0.6
4,639,666	-		Shewana3_3862	0.69	-0.2
4,639,700	+		Shewana3_3862	0.70	-0.1
4,639,798	+		Shewana3_3862	0.76	+0.4
4,639,847	+		Shewana3_3862	0.78	-0.1
4,639,979	-		Shewana3_3862	0.85	-0.9
4,639,979	-		Shewana3_3862	0.85	-0.5
4,639,979	-		Shewana3_3862	0.85	-0.9
4,640,091	-				-1.7
4,640,094	+				-0.8
4,640,154	+				-0.3
4,640,155	-				-0.4
4,640,210	+				-0.2
4,640,210	+				+0.1
4,640,328	+		Shewana3_3863	0.13	-0.8
4,640,341	-		Shewana3_3863	0.15	-1.1
4,640,362	-		Shewana3_3863	0.19	-0.7
4,640,421	-		Shewana3_3863	0.28	-2.4
4,640,421	-		Shewana3_3863	0.28	-1.5
4,640,421	-		Shewana3_3863	0.28	-0.2
4,640,421	-		Shewana3_3863	0.28	+0.6
4,640,442	-		Shewana3_3863	0.31	+1.1
4,640,461	-		Shewana3_3863	0.34	+0.5
4,640,513	-		Shewana3_3863	0.43	-0.5
4,640,513	-		Shewana3_3863	0.43	+0.4
4,640,539	+		Shewana3_3863	0.47	-0.2
4,640,539	+		Shewana3_3863	0.47	-0.2
4,640,539	+		Shewana3_3863	0.47	-0.7
4,640,547	-		Shewana3_3863	0.48	-1.4
4,640,660	+		Shewana3_3863	0.66	-0.3
4,640,663	+		Shewana3_3863	0.67	+0.1
4,640,673	+		Shewana3_3863	0.68	-1.2
4,640,673	+		Shewana3_3863	0.68	-1.3
4,640,681	-		Shewana3_3863	0.69	+1.1
4,640,737	-		Shewana3_3863	0.78	-0.4
4,640,821	+				-0.4
4,641,013	+				-0.4
4,641,199	+		Shewana3_3864	0.25	-0.6