Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3854

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
4,627,282	+				-1.4
4,627,282	+				-0.3
4,627,290	-				-1.7
4,627,292	+				-0.5
4,627,321	-		Shewana3_3853	0.12	+0.4
4,627,367	+		Shewana3_3853	0.17	-0.2
4,627,368	-		Shewana3_3853	0.17	-0.8
4,627,370	-		Shewana3_3853	0.17	-0.9
4,627,375	-		Shewana3_3853	0.17	-0.7
4,627,375	-		Shewana3_3853	0.17	-1.1
4,627,408	+		Shewana3_3853	0.21	-0.2
4,627,408	-		Shewana3_3853	0.21	+0.3
4,627,413	-		Shewana3_3853	0.21	+0.8
4,627,460	+		Shewana3_3853	0.26	-1.4
4,627,488	+		Shewana3_3853	0.28	-0.9
4,627,496	-		Shewana3_3853	0.29	-0.3
4,627,520	+		Shewana3_3853	0.31	+0.9
4,627,528	-		Shewana3_3853	0.32	-0.2
4,627,528	-		Shewana3_3853	0.32	+0.1
4,627,576	+		Shewana3_3853	0.37	-0.1
4,627,576	+		Shewana3_3853	0.37	-1.3
4,627,576	+		Shewana3_3853	0.37	+0.0
4,627,584	-		Shewana3_3853	0.37	+0.2
4,627,584	-		Shewana3_3853	0.37	+0.7
4,627,584	-		Shewana3_3853	0.37	+0.6
4,627,600	+		Shewana3_3853	0.39	-0.7
4,627,657	+		Shewana3_3853	0.44	-1.4
4,627,657	+		Shewana3_3853	0.44	-1.4
4,627,665	-		Shewana3_3853	0.45	-0.5
4,627,670	-		Shewana3_3853	0.46	-0.9
4,627,672	-		Shewana3_3853	0.46	+0.5
4,627,708	-		Shewana3_3853	0.49	+0.3
4,627,882	-		Shewana3_3853	0.66	+0.4
4,627,882	-		Shewana3_3853	0.66	-0.6
4,627,892	-		Shewana3_3853	0.67	-0.4
4,627,923	+		Shewana3_3853	0.70	-0.7
4,627,924	-		Shewana3_3853	0.70	+0.0
4,627,931	-		Shewana3_3853	0.70	-0.8
4,628,012	+		Shewana3_3853	0.78	+1.0
4,628,012	+		Shewana3_3853	0.78	-1.0
4,628,020	-		Shewana3_3853	0.79	-1.3
4,628,030	-		Shewana3_3853	0.80	-1.6
4,628,036	+		Shewana3_3853	0.80	-1.9
4,628,046	+		Shewana3_3853	0.81	-2.1
4,628,052	-		Shewana3_3853	0.82	-0.2
4,628,054	-		Shewana3_3853	0.82	+0.0
4,628,061	-		Shewana3_3853	0.83	-0.1
4,628,238	+				-0.4
4,628,336	-				-0.3
4,628,336	-				-0.8
4,628,361	+				+0.3
4,628,426	+				-1.0
4,628,844	+		Shewana3_3854	0.28	+0.2
4,628,849	+		Shewana3_3854	0.28	-0.0
4,628,852	-		Shewana3_3854	0.29	-0.1
4,628,893	-		Shewana3_3854	0.30	-0.9
4,628,907	-		Shewana3_3854	0.31	+0.2
4,628,907	-		Shewana3_3854	0.31	-0.1
4,629,141	+		Shewana3_3854	0.42	-0.1
4,629,149	-		Shewana3_3854	0.43	-0.3
4,629,204	-		Shewana3_3854	0.45	+0.6
4,629,229	-		Shewana3_3854	0.46	+0.3
4,629,283	-		Shewana3_3854	0.49	+0.1
4,629,369	+		Shewana3_3854	0.53	-1.3
4,629,425	+		Shewana3_3854	0.56	-1.1
4,629,593	+		Shewana3_3854	0.64	-0.6
4,629,678	+		Shewana3_3854	0.68	-0.7
4,629,705	-		Shewana3_3854	0.69	-0.2
4,629,745	+		Shewana3_3854	0.71	-1.8
4,629,778	+		Shewana3_3854	0.73	-0.9
4,629,784	-		Shewana3_3854	0.73	-0.5
4,629,784	-		Shewana3_3854	0.73	+0.1
4,629,791	+		Shewana3_3854	0.73	-0.7
4,629,791	+		Shewana3_3854	0.73	-1.1
4,629,799	-		Shewana3_3854	0.74	-1.3
4,629,799	-		Shewana3_3854	0.74	-1.1
4,629,889	+		Shewana3_3854	0.78	+0.6
4,629,907	+		Shewana3_3854	0.79	-0.7
4,629,970	+		Shewana3_3854	0.82	-0.6
4,629,978	-		Shewana3_3854	0.82	-0.2
4,629,990	-		Shewana3_3854	0.83	-1.1
4,629,990	-		Shewana3_3854	0.83	+0.2
4,630,017	-		Shewana3_3854	0.84	+0.3
4,630,251	+				-2.4
4,630,254	-				+0.1
4,630,268	-				-2.3
4,630,285	+				-0.7
4,630,285	+				+0.6
4,630,285	+				-1.5
4,630,293	-				+0.1
4,630,311	-				-1.4
4,630,384	-				-0.2
4,630,530	+		Shewana3_3855	0.15	-0.1
4,630,573	+		Shewana3_3855	0.18	-0.4
4,630,612	-		Shewana3_3855	0.21	-0.1
4,630,634	-		Shewana3_3855	0.23	-0.8
4,630,634	-		Shewana3_3855	0.23	-0.2
4,630,667	+		Shewana3_3855	0.26	-2.8
4,630,869	+		Shewana3_3855	0.42	+0.7
4,630,901	-		Shewana3_3855	0.45	-0.7
4,630,934	-		Shewana3_3855	0.47	-1.8
4,630,959	+		Shewana3_3855	0.49	+0.1
4,630,967	-		Shewana3_3855	0.50	-0.5
4,630,967	-		Shewana3_3855	0.50	-1.6
4,630,971	-		Shewana3_3855	0.50	-0.3
4,631,099	+		Shewana3_3855	0.61	-0.9
4,631,157	-		Shewana3_3855	0.65	+0.9
4,631,220	+		Shewana3_3855	0.71	-0.3
4,631,252	+		Shewana3_3855	0.73	-2.2
4,631,317	-		Shewana3_3855	0.78	-0.0