Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3784

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
4,542,963	+				+0.2
4,542,972	+				+0.2
4,542,972	+				-0.0
4,542,972	+				+0.3
4,542,980	-				-1.6
4,543,106	-				-0.1
4,543,108	-				-0.1
4,543,194	+				+0.1
4,543,256	-				+0.0
4,543,288	-		Shewana3_3783	0.14	-0.5
4,543,437	+		Shewana3_3783	0.37	-0.3
4,543,464	+		Shewana3_3783	0.41	-0.2
4,543,465	+		Shewana3_3783	0.41	-0.5
4,543,577	-		Shewana3_3783	0.59	-0.9
4,543,606	-		Shewana3_3783	0.63	-1.4
4,543,661	-		Shewana3_3783	0.71	-1.2
4,543,666	-		Shewana3_3783	0.72	-0.2
4,543,759	+		Shewana3_3783	0.86	-0.7
4,543,759	+		Shewana3_3783	0.86	-1.1
4,543,867	-				-1.1
4,543,867	-				-0.6
4,543,899	-				-1.4
4,543,913	-				-0.1
4,543,914	-				-2.3
4,543,940	-				-0.8
4,544,019	-		Shewana3_3784	0.18	-0.5
4,544,038	+		Shewana3_3784	0.20	-0.5
4,544,063	+		Shewana3_3784	0.24	-0.7
4,544,117	-		Shewana3_3784	0.32	+0.1
4,544,164	+		Shewana3_3784	0.40	-1.6
4,544,164	+		Shewana3_3784	0.40	-0.1
4,544,172	-		Shewana3_3784	0.41	-0.3
4,544,172	-		Shewana3_3784	0.41	-0.9
4,544,189	+		Shewana3_3784	0.43	-0.7
4,544,191	+		Shewana3_3784	0.44	-0.5
4,544,199	-		Shewana3_3784	0.45	-0.4
4,544,199	-		Shewana3_3784	0.45	-0.5
4,544,208	+		Shewana3_3784	0.46	-1.4
4,544,243	+		Shewana3_3784	0.52	-1.9
4,544,243	+		Shewana3_3784	0.52	+1.2
4,544,244	+		Shewana3_3784	0.52	-0.5
4,544,264	+		Shewana3_3784	0.55	-0.8
4,544,279	+		Shewana3_3784	0.57	-0.9
4,544,279	+		Shewana3_3784	0.57	-2.0
4,544,279	+		Shewana3_3784	0.57	-1.7
4,544,279	+		Shewana3_3784	0.57	+0.3
4,544,279	+		Shewana3_3784	0.57	-0.9
4,544,279	+		Shewana3_3784	0.57	-0.8
4,544,279	+		Shewana3_3784	0.57	-0.2
4,544,287	-		Shewana3_3784	0.58	+0.5
4,544,287	-		Shewana3_3784	0.58	+0.2
4,544,287	-		Shewana3_3784	0.58	+0.9
4,544,287	-		Shewana3_3784	0.58	-0.4
4,544,287	-		Shewana3_3784	0.58	-0.4
4,544,314	+		Shewana3_3784	0.62	-2.3
4,544,363	+		Shewana3_3784	0.70	-1.8
4,544,371	-		Shewana3_3784	0.71	-0.4
4,544,371	-		Shewana3_3784	0.71	-0.6
4,544,371	-		Shewana3_3784	0.71	-0.2
4,544,373	-		Shewana3_3784	0.71	+0.9
4,544,377	-		Shewana3_3784	0.72	-0.3
4,544,493	+		Shewana3_3784	0.89	-0.8
4,544,493	+		Shewana3_3784	0.89	-1.1
4,544,493	+		Shewana3_3784	0.89	-0.9
4,544,493	+		Shewana3_3784	0.89	-0.3
4,544,493	+		Shewana3_3784	0.89	+0.5
4,544,493	+		Shewana3_3784	0.89	-1.9
4,544,493	+		Shewana3_3784	0.89	+0.1
4,544,501	-				+0.2
4,544,501	-				+1.3
4,544,501	-				+0.4
4,544,501	-				-0.4
4,544,501	-				-0.5
4,544,501	-				+0.2
4,544,501	-				-0.1
4,544,501	-				+0.2
4,544,501	-				+0.3
4,544,501	-				+0.2
4,544,501	-				+0.8
4,544,501	-				+0.1
4,544,501	-				+0.2
4,544,501	-				+0.2
4,544,501	-				+0.1
4,544,501	-				-0.4
4,544,502	+				-1.7
4,544,516	+				-2.1
4,544,517	-				+0.1
4,544,526	+				-0.6
4,544,591	-				+0.6
4,544,596	-				-0.3
4,544,604	-				-0.2
4,544,684	-				-0.4
4,544,686	+				+0.4
4,544,694	-				-1.8
4,544,694	-				-0.2
4,544,694	-				-0.6
4,544,733	-				-0.7
4,544,785	+				-0.6
4,544,793	-				+1.3
4,544,824	-				+0.4
4,544,838	-				-0.1
4,544,838	-				-1.7
4,544,899	+				-0.0
4,544,904	+				-0.1
4,544,904	+				-0.2
4,544,904	+				+0.5
4,544,904	+				+0.1
4,544,904	+				-1.6
4,544,912	-				-0.2
4,544,912	-				-0.8
4,544,926	+				+0.6
4,544,931	+				+0.9
4,544,944	+				-1.1
4,544,945	-				-0.7
4,545,023	-				-0.3
4,545,024	+				-0.1
4,545,158	-		Shewana3_3785	0.16	+0.6
4,545,227	-		Shewana3_3785	0.19	-0.3
4,545,229	-		Shewana3_3785	0.19	-1.3
4,545,237	-		Shewana3_3785	0.20	-0.8
4,545,248	+		Shewana3_3785	0.20	-1.1
4,545,284	-		Shewana3_3785	0.22	-0.2
4,545,284	-		Shewana3_3785	0.22	-0.4
4,545,284	-		Shewana3_3785	0.22	-0.8
4,545,309	+		Shewana3_3785	0.23	-0.8
4,545,309	+		Shewana3_3785	0.23	+0.2
4,545,312	-		Shewana3_3785	0.23	+1.0
4,545,317	-		Shewana3_3785	0.24	-0.5
4,545,317	-		Shewana3_3785	0.24	-1.1
4,545,333	-		Shewana3_3785	0.24	-2.2
4,545,342	+		Shewana3_3785	0.25	+0.3
4,545,345	-		Shewana3_3785	0.25	-0.4
4,545,351	-		Shewana3_3785	0.25	-0.5
4,545,363	-		Shewana3_3785	0.26	-1.5
4,545,381	+		Shewana3_3785	0.27	-0.7
4,545,417	+		Shewana3_3785	0.28	+0.2
4,545,479	-		Shewana3_3785	0.31	-0.9
4,545,531	-		Shewana3_3785	0.34	-1.1
4,545,557	-		Shewana3_3785	0.35	-1.1