Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3694

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
4,433,602	-		Shewana3_3692	0.74	+0.4
4,433,602	-		Shewana3_3692	0.74	+0.4
4,433,602	-		Shewana3_3692	0.74	+1.6
4,433,617	+		Shewana3_3692	0.75	-2.1
4,433,713	-		Shewana3_3692	0.85	-0.3
4,433,724	+		Shewana3_3692	0.86	+1.1
4,433,755	+		Shewana3_3692	0.89	+0.1
4,433,860	+				+1.2
4,433,920	-				+0.2
4,433,931	-		Shewana3_3693	0.11	+0.6
4,433,980	-		Shewana3_3693	0.18	-0.6
4,434,004	+		Shewana3_3693	0.22	+0.3
4,434,004	+		Shewana3_3693	0.22	-1.2
4,434,012	-		Shewana3_3693	0.23	+1.1
4,434,122	+		Shewana3_3693	0.40	-1.5
4,434,172	-		Shewana3_3693	0.48	+0.5
4,434,326	+		Shewana3_3693	0.72	-1.0
4,434,334	-		Shewana3_3693	0.73	+0.4
4,434,343	+		Shewana3_3693	0.75	-2.3
4,434,350	+		Shewana3_3693	0.76	-0.5
4,434,360	+		Shewana3_3693	0.77	-0.5
4,434,368	-		Shewana3_3693	0.78	+0.4
4,434,373	-		Shewana3_3693	0.79	+0.7
4,434,406	-		Shewana3_3693	0.84	+0.3
4,434,438	+		Shewana3_3693	0.89	-0.0
4,434,461	-				+0.5
4,434,501	-				+0.4
4,434,620	+				-0.3
4,434,726	-		Shewana3_3694	0.19	+0.3
4,434,797	-		Shewana3_3694	0.25	-0.2
4,434,852	+		Shewana3_3694	0.30	-0.1
4,434,865	-		Shewana3_3694	0.31	+0.1
4,434,889	+		Shewana3_3694	0.33	+0.6
4,434,897	-		Shewana3_3694	0.34	+0.1
4,434,903	+		Shewana3_3694	0.35	-1.5
4,434,923	-		Shewana3_3694	0.36	+0.2
4,435,040	+		Shewana3_3694	0.47	-0.2
4,435,145	-		Shewana3_3694	0.56	+1.5
4,435,145	-		Shewana3_3694	0.56	-0.2
4,435,217	-		Shewana3_3694	0.62	+0.5
4,435,258	+		Shewana3_3694	0.66	-0.1
4,435,267	+		Shewana3_3694	0.66	-0.1
4,435,273	-		Shewana3_3694	0.67	+0.8
4,435,495	-		Shewana3_3694	0.86	-0.1
4,435,561	-				+0.1
4,435,625	+				-0.3
4,435,627	+				-0.2
4,435,627	+				-0.5
4,435,633	-				+0.6
4,435,635	-				-0.1
4,435,793	+				-0.0
4,435,830	+				+1.2
4,435,843	-				-0.1
4,435,972	-		Shewana3_3695	0.23	-0.3
4,436,049	+		Shewana3_3695	0.32	+0.0
4,436,191	+		Shewana3_3695	0.47	-0.2
4,436,301	-		Shewana3_3695	0.59	-0.0
4,436,439	-		Shewana3_3695	0.74	-0.8
4,436,503	-		Shewana3_3695	0.81	-1.3
4,436,518	+		Shewana3_3695	0.83	-0.9