Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3643

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
4,374,115	-				+0.4
4,374,194	+				+0.3
4,374,202	-				+0.6
4,374,218	-				+0.1
4,374,218	-				-0.5
4,374,220	+				-0.3
4,374,220	+				+0.2
4,374,220	+				-1.2
4,374,220	+				+0.4
4,374,220	+				-0.5
4,374,220	+				-1.8
4,374,228	-				-0.1
4,374,326	-		Shewana3_3642	0.13	+0.5
4,374,386	-		Shewana3_3642	0.21	-0.1
4,374,468	-		Shewana3_3642	0.31	-0.1
4,374,674	+		Shewana3_3642	0.57	-0.5
4,374,677	-		Shewana3_3642	0.57	+0.0
4,374,733	-		Shewana3_3642	0.64	-0.6
4,374,966	-				+0.1
4,375,121	+				-0.9
4,375,121	+				-0.4
4,375,121	+				+0.7
4,375,121	+				-3.4
4,375,121	+				-0.0
4,375,174	-				+0.8
4,375,174	-				-0.0
4,375,174	-				+0.0
4,375,337	+				-0.7
4,375,387	+				-2.0
4,375,514	+		Shewana3_3643	0.12	-0.6
4,375,522	-		Shewana3_3643	0.12	+0.1
4,375,522	-		Shewana3_3643	0.12	-1.0
4,375,559	+		Shewana3_3643	0.13	-0.4
4,375,659	+		Shewana3_3643	0.16	-2.2
4,375,659	+		Shewana3_3643	0.16	+0.3
4,375,659	+		Shewana3_3643	0.16	-2.6
4,375,865	+		Shewana3_3643	0.20	-0.9
4,375,873	-		Shewana3_3643	0.21	-0.6
4,375,883	-		Shewana3_3643	0.21	-0.1
4,375,924	-		Shewana3_3643	0.22	-0.2
4,376,030	-		Shewana3_3643	0.24	-0.6
4,376,097	+		Shewana3_3643	0.26	-1.0
4,376,142	-		Shewana3_3643	0.27	+0.2
4,376,233	-		Shewana3_3643	0.29	-0.6
4,376,402	+		Shewana3_3643	0.33	-1.9
4,376,496	-		Shewana3_3643	0.35	+0.9
4,376,630	+		Shewana3_3643	0.38	-0.8
4,376,630	+		Shewana3_3643	0.38	-0.1
4,376,638	-		Shewana3_3643	0.39	-0.3
4,377,128	+		Shewana3_3643	0.50	-1.6
4,377,290	+		Shewana3_3643	0.54	-0.3
4,377,291	-		Shewana3_3643	0.54	-0.6
4,377,298	-		Shewana3_3643	0.54	-0.7
4,377,338	-		Shewana3_3643	0.55	-1.7
4,377,546	+		Shewana3_3643	0.60	-1.3
4,377,561	-		Shewana3_3643	0.60	-1.8
4,377,567	-		Shewana3_3643	0.60	+0.0
4,377,871	+		Shewana3_3643	0.68	+0.3
4,377,879	-		Shewana3_3643	0.68	+0.3
4,377,927	+		Shewana3_3643	0.69	-0.7
4,377,937	-		Shewana3_3643	0.69	+0.3
4,377,942	-		Shewana3_3643	0.69	-1.3
4,378,113	-		Shewana3_3643	0.73	-0.4
4,378,118	+		Shewana3_3643	0.73	-0.7
4,378,119	+		Shewana3_3643	0.73	-0.5
4,378,126	-		Shewana3_3643	0.74	-1.5
4,378,245	+		Shewana3_3643	0.76	-0.1
4,378,659	+		Shewana3_3643	0.86	-0.9
4,378,954	+				-0.1
4,378,964	+				-0.4
4,378,964	+				+0.1
4,379,367	+				-2.1
4,379,367	+				+0.1
4,379,375	-				-1.3
4,379,375	-				-0.8
4,379,375	-				-0.3
4,379,375	-				-2.4
4,379,375	-				-0.3
4,379,607	-		Shewana3_3644	0.24	-0.9
4,379,737	+		Shewana3_3644	0.32	-1.3
4,380,078	-		Shewana3_3644	0.55	-3.5
4,380,128	+		Shewana3_3644	0.58	-0.1
4,380,136	-		Shewana3_3644	0.59	-0.0