Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3408
Experiment: Chloramphenicol 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,075,984 | + | Shewana3_3406 | 0.81 | +0.8 | |
4,075,984 | + | Shewana3_3406 | 0.81 | -1.0 | |
4,076,019 | + | Shewana3_3406 | 0.84 | +0.9 | |
4,076,048 | + | Shewana3_3406 | 0.86 | +0.5 | |
4,076,073 | + | Shewana3_3406 | 0.88 | +0.6 | |
4,076,890 | + | panB | Shewana3_3408 | 0.15 | -1.7 |
4,077,047 | + | panB | Shewana3_3408 | 0.34 | -0.4 |
4,077,081 | + | panB | Shewana3_3408 | 0.39 | -1.7 |
4,077,163 | + | panB | Shewana3_3408 | 0.49 | -1.1 |
4,077,433 | + | panB | Shewana3_3408 | 0.83 | -0.9 |
4,077,443 | + | panB | Shewana3_3408 | 0.84 | -1.2 |
4,078,547 | - | +0.4 | |||
4,078,547 | - | -0.1 | |||
4,078,547 | - | +0.2 | |||
4,078,547 | - | +0.6 | |||
4,078,552 | - | +0.9 |
Or see this region's nucleotide sequence