Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3335

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
3,996,383	+		Shewana3_3334	0.10	-0.2
3,996,575	-		Shewana3_3334	0.30	+0.7
3,996,678	-		Shewana3_3334	0.40	-0.2
3,996,799	+		Shewana3_3334	0.52	+0.3
3,996,807	-		Shewana3_3334	0.53	+0.2
3,996,807	-		Shewana3_3334	0.53	+0.1
3,996,807	-		Shewana3_3334	0.53	+0.6
3,996,957	-		Shewana3_3334	0.68	+0.6
3,997,012	-		Shewana3_3334	0.73	+0.7
3,997,142	+		Shewana3_3334	0.86	-1.2
3,997,263	+				-0.2
3,997,266	-				+0.8
3,997,269	-				-0.5
3,997,431	+				-0.3
3,997,439	-				+1.0
3,997,598	+				-0.9
3,997,725	+		Shewana3_3335	0.13	+0.3
3,997,733	-		Shewana3_3335	0.13	+0.3
3,997,850	+		Shewana3_3335	0.17	-1.0
3,997,858	-		Shewana3_3335	0.17	+0.4
3,997,918	+		Shewana3_3335	0.19	-1.2
3,998,059	+		Shewana3_3335	0.23	+0.6
3,998,077	+		Shewana3_3335	0.24	-1.5
3,998,207	+		Shewana3_3335	0.28	-0.3
3,998,371	+		Shewana3_3335	0.32	+0.4
3,998,371	+		Shewana3_3335	0.32	-0.9
3,998,371	+		Shewana3_3335	0.32	+0.4
3,998,371	+		Shewana3_3335	0.32	+1.0
3,998,371	+		Shewana3_3335	0.32	+0.1
3,998,379	-		Shewana3_3335	0.33	+0.2
3,998,487	-		Shewana3_3335	0.36	-0.3
3,998,520	+		Shewana3_3335	0.37	-0.1
3,998,608	-		Shewana3_3335	0.39	-0.4
3,998,707	+		Shewana3_3335	0.42	-0.6
3,998,866	-		Shewana3_3335	0.47	-0.2
3,998,926	+		Shewana3_3335	0.49	-0.3
3,998,934	-		Shewana3_3335	0.49	+0.7
3,998,934	-		Shewana3_3335	0.49	-0.3
3,999,024	+		Shewana3_3335	0.52	+0.7
3,999,041	+		Shewana3_3335	0.52	-0.3
3,999,041	+		Shewana3_3335	0.52	-0.8
3,999,179	-		Shewana3_3335	0.56	+0.1
3,999,328	+		Shewana3_3335	0.61	-0.4
3,999,354	-		Shewana3_3335	0.62	-0.1
3,999,565	-		Shewana3_3335	0.68	-0.7
3,999,570	-		Shewana3_3335	0.68	-0.1
3,999,610	+		Shewana3_3335	0.69	-0.9
3,999,615	+		Shewana3_3335	0.69	-1.7
3,999,623	-		Shewana3_3335	0.70	+0.3
3,999,730	-		Shewana3_3335	0.73	+0.0
3,999,746	+		Shewana3_3335	0.73	-1.4
3,999,920	+		Shewana3_3335	0.78	-0.6
3,999,935	+		Shewana3_3335	0.79	-0.7
3,999,998	+		Shewana3_3335	0.81	-1.3
4,000,006	-		Shewana3_3335	0.81	-0.1
4,000,100	-		Shewana3_3335	0.84	-1.1
4,000,203	+		Shewana3_3335	0.87	-1.1
4,000,236	+		Shewana3_3335	0.88	+0.0
4,000,301	-		Shewana3_3335	0.90	-0.2
4,000,338	+				-1.2
4,000,368	-				+0.0
4,000,436	-				+0.5
4,000,477	+				+0.3
4,000,485	-				+0.6
4,000,485	-				+0.4
4,000,485	-				+0.6
4,000,702	+				-1.1
4,000,717	-				-0.3
4,001,008	+				-0.1
4,001,380	+		Shewana3_3336	0.26	+0.6
4,001,380	+		Shewana3_3336	0.26	+0.1
4,001,570	+		Shewana3_3336	0.41	+0.7
4,001,578	-		Shewana3_3336	0.42	-0.3