Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3256

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
3,895,815	+		Shewana3_3254	0.41	+0.1
3,896,196	+		Shewana3_3255	0.33	+0.3
3,896,233	-		Shewana3_3255	0.42	-0.3
3,896,272	+		Shewana3_3255	0.52	-1.7
3,896,279	+		Shewana3_3255	0.53	+0.3
3,896,308	+		Shewana3_3255	0.60	-0.2
3,896,333	-		Shewana3_3255	0.66	-2.0
3,896,536	-				-0.8
3,896,569	-				-0.0
3,896,569	-				-0.5
3,896,599	+				-2.9
3,896,669	+				-0.5
3,896,777	-				+0.0
3,896,804	+				-1.1
3,896,804	+				-1.1
3,896,805	+				+0.1
3,896,813	-				+1.1
3,897,073	+		Shewana3_3256	0.22	-2.4
3,897,138	-		Shewana3_3256	0.26	-1.6
3,897,138	-		Shewana3_3256	0.26	-0.6
3,897,140	+		Shewana3_3256	0.26	-1.1
3,897,213	+		Shewana3_3256	0.31	-0.2
3,897,349	+		Shewana3_3256	0.39	-1.5
3,897,349	+		Shewana3_3256	0.39	-0.7
3,897,450	-		Shewana3_3256	0.45	-0.1
3,897,488	+		Shewana3_3256	0.47	-0.8
3,897,618	-		Shewana3_3256	0.55	-0.5
3,897,647	-		Shewana3_3256	0.57	+1.0
3,897,647	-		Shewana3_3256	0.57	-1.1
3,897,718	+		Shewana3_3256	0.61	+0.0
3,897,992	+		Shewana3_3256	0.78	-0.8
3,898,136	+		Shewana3_3256	0.87	-0.2
3,898,293	+				+0.9
3,898,301	-				-0.6
3,898,312	-				-0.7
3,898,389	-				+0.2
3,898,460	-				+0.8
3,898,503	-				+0.6
3,898,513	-				+0.0
3,898,607	-		Shewana3_3257	0.14	-0.2
3,898,710	-		Shewana3_3257	0.22	-0.4
3,898,710	-		Shewana3_3257	0.22	-0.3
3,898,803	+		Shewana3_3257	0.28	-2.1
3,898,803	+		Shewana3_3257	0.28	-1.0
3,898,811	-		Shewana3_3257	0.29	+0.7
3,898,811	-		Shewana3_3257	0.29	+0.8
3,898,811	-		Shewana3_3257	0.29	-0.2
3,898,845	-		Shewana3_3257	0.31	-0.5
3,898,845	-		Shewana3_3257	0.31	+0.4
3,898,991	+		Shewana3_3257	0.41	-0.1
3,899,172	+		Shewana3_3257	0.54	-0.2
3,899,261	-		Shewana3_3257	0.60	-0.4
3,899,299	+		Shewana3_3257	0.63	-0.0
3,899,345	+		Shewana3_3257	0.66	-0.2