Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3199

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
3,837,649	-		Shewana3_3198	0.39	+0.1
3,837,807	-		Shewana3_3198	0.49	+0.3
3,837,871	+		Shewana3_3198	0.53	+0.1
3,837,871	+		Shewana3_3198	0.53	-0.7
3,837,889	-		Shewana3_3198	0.54	+0.3
3,837,952	-		Shewana3_3198	0.58	+0.2
3,837,980	-		Shewana3_3198	0.60	+0.4
3,837,985	-		Shewana3_3198	0.60	+0.3
3,838,040	+		Shewana3_3198	0.64	+0.4
3,838,092	-		Shewana3_3198	0.67	-0.4
3,838,116	+		Shewana3_3198	0.69	+1.1
3,838,141	-		Shewana3_3198	0.70	+1.3
3,838,146	-		Shewana3_3198	0.70	+0.8
3,838,380	-		Shewana3_3198	0.85	+0.5
3,838,448	-		Shewana3_3198	0.90	-0.5
3,838,523	-				-0.3
3,838,534	+				+0.2
3,838,540	+				+0.1
3,838,540	+				+1.1
3,838,595	-				-0.1
3,838,705	+				-0.2
3,838,705	+				+0.7
3,838,705	-				-1.0
3,838,713	-				+1.9
3,838,741	+				-0.5
3,838,797	+				+0.6
3,838,878	-		Shewana3_3199	0.12	-1.0
3,838,970	+		Shewana3_3199	0.16	-0.1
3,838,979	+		Shewana3_3199	0.16	-0.3
3,839,009	-		Shewana3_3199	0.18	-0.7
3,839,032	-		Shewana3_3199	0.19	-0.6
3,839,037	-		Shewana3_3199	0.19	+0.4
3,839,243	+		Shewana3_3199	0.28	-0.6
3,839,307	+		Shewana3_3199	0.31	-2.5
3,839,307	+		Shewana3_3199	0.31	-0.4
3,839,307	+		Shewana3_3199	0.31	+0.2
3,839,315	-		Shewana3_3199	0.31	-0.4
3,839,315	-		Shewana3_3199	0.31	-0.2
3,839,317	-		Shewana3_3199	0.31	-0.6
3,839,331	-		Shewana3_3199	0.32	+0.1
3,839,402	+		Shewana3_3199	0.35	-0.4
3,839,453	-		Shewana3_3199	0.37	+0.2
3,839,467	-		Shewana3_3199	0.38	-1.1
3,839,660	+		Shewana3_3199	0.46	-0.6
3,839,668	-		Shewana3_3199	0.47	+1.1
3,839,673	-		Shewana3_3199	0.47	+0.6
3,840,155	-		Shewana3_3199	0.68	+0.1
3,840,299	-		Shewana3_3199	0.74	-0.3
3,840,464	+		Shewana3_3199	0.82	-1.0
3,840,903	-				-0.5
3,841,273	+				-0.6
3,841,281	-				+0.6
3,841,419	+				+0.2
3,841,533	-				+0.7
3,841,578	-				+0.1
3,841,670	-				-0.2
3,841,680	-				-0.1
3,841,845	-				-1.5