Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3194
Experiment: Chloramphenicol 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,831,459 | - | Shewana3_3193 | 0.19 | +0.5 | |
3,831,550 | - | Shewana3_3193 | 0.27 | -1.2 | |
3,831,654 | - | Shewana3_3193 | 0.36 | +1.6 | |
3,831,738 | - | Shewana3_3193 | 0.43 | +0.6 | |
3,831,764 | - | Shewana3_3193 | 0.46 | +0.4 | |
3,831,834 | - | Shewana3_3193 | 0.52 | +0.2 | |
3,831,849 | - | Shewana3_3193 | 0.53 | +0.4 | |
3,831,990 | + | Shewana3_3193 | 0.65 | -0.9 | |
3,832,092 | - | Shewana3_3193 | 0.74 | +0.1 | |
3,832,094 | + | Shewana3_3193 | 0.75 | -1.0 | |
3,832,301 | - | +0.1 | |||
3,832,512 | - | Shewana3_3194 | 0.30 | +0.4 | |
3,832,677 | - | Shewana3_3194 | 0.70 | -0.1 | |
3,832,897 | + | -1.8 | |||
3,832,915 | - | -0.3 | |||
3,833,091 | + | -0.0 | |||
3,833,092 | + | -0.1 | |||
3,833,122 | + | +0.3 | |||
3,833,130 | - | -0.6 | |||
3,833,257 | + | +0.1 | |||
3,833,257 | + | -1.1 |
Or see this region's nucleotide sequence