Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3121

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
3,743,981	+		Shewana3_3120	0.42	-0.8
3,744,029	-		Shewana3_3120	0.45	-1.5
3,744,108	-		Shewana3_3120	0.50	-0.3
3,744,321	-		Shewana3_3120	0.64	-0.0
3,744,406	+		Shewana3_3120	0.70	+0.4
3,744,406	+		Shewana3_3120	0.70	+1.2
3,744,406	+		Shewana3_3120	0.70	-0.2
3,744,414	-		Shewana3_3120	0.70	-0.7
3,744,414	-		Shewana3_3120	0.70	-0.0
3,744,414	-		Shewana3_3120	0.70	-0.5
3,744,553	+		Shewana3_3120	0.80	-0.3
3,744,553	+		Shewana3_3120	0.80	-0.2
3,744,735	+				+0.4
3,744,751	-				-0.0
3,744,877	-				+1.0
3,744,908	+				-0.1
3,745,010	-				+0.4
3,745,252	+		Shewana3_3121	0.12	+0.9
3,745,263	+		Shewana3_3121	0.13	-1.4
3,745,263	+		Shewana3_3121	0.13	-1.3
3,745,271	-		Shewana3_3121	0.13	+0.4
3,745,306	-		Shewana3_3121	0.14	+0.8
3,745,573	-		Shewana3_3121	0.24	+0.9
3,745,573	-		Shewana3_3121	0.24	+0.5
3,745,603	-		Shewana3_3121	0.25	-0.1
3,745,754	-		Shewana3_3121	0.31	-0.1
3,745,766	-		Shewana3_3121	0.31	-0.4
3,745,852	-		Shewana3_3121	0.35	+0.9
3,745,932	+		Shewana3_3121	0.38	-0.1
3,745,983	+		Shewana3_3121	0.40	-1.1
3,746,102	-		Shewana3_3121	0.44	-0.4
3,746,145	-		Shewana3_3121	0.46	-0.4
3,746,205	-		Shewana3_3121	0.48	-0.6
3,746,289	-		Shewana3_3121	0.51	-1.2
3,746,413	-		Shewana3_3121	0.56	-0.7
3,746,458	+		Shewana3_3121	0.57	+1.9
3,746,458	+		Shewana3_3121	0.57	+0.3
3,746,466	-		Shewana3_3121	0.58	-0.1
3,746,503	-		Shewana3_3121	0.59	-0.3
3,746,592	+		Shewana3_3121	0.62	-2.0
3,746,964	-		Shewana3_3121	0.76	+0.2
3,747,008	+		Shewana3_3121	0.78	-2.7
3,747,027	-		Shewana3_3121	0.79	+0.2
3,747,043	+		Shewana3_3121	0.79	-1.5
3,747,043	+		Shewana3_3121	0.79	-0.5
3,747,051	-		Shewana3_3121	0.80	+0.9
3,747,113	+		Shewana3_3121	0.82	-0.5
3,747,123	+		Shewana3_3121	0.82	-0.1
3,747,153	+		Shewana3_3121	0.84	-0.8
3,747,161	-		Shewana3_3121	0.84	-1.8
3,747,166	-		Shewana3_3121	0.84	-2.0
3,747,306	+		Shewana3_3121	0.89	-0.5
3,747,314	-		Shewana3_3121	0.90	-0.2
3,747,507	+				+3.2
3,747,877	-				-0.5
3,747,930	-				-0.6
3,748,406	+		Shewana3_3122	0.38	-1.1
3,748,471	+		Shewana3_3122	0.45	-0.1
3,748,558	-		Shewana3_3122	0.53	+0.1
3,748,585	+		Shewana3_3122	0.56	+0.6