Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3102
Experiment: Chloramphenicol 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,720,937 | + | Shewana3_3101 | 0.67 | -0.7 | |
3,721,180 | + | Shewana3_3101 | 0.86 | +0.4 | |
3,721,183 | - | Shewana3_3101 | 0.86 | -0.9 | |
3,721,361 | + | +1.8 | |||
3,721,406 | - | -0.1 | |||
3,721,459 | + | -0.5 | |||
3,721,546 | + | Shewana3_3102 | 0.26 | -0.2 | |
3,721,590 | + | Shewana3_3102 | 0.35 | -0.3 | |
3,721,707 | + | Shewana3_3102 | 0.58 | -0.8 | |
3,721,823 | - | Shewana3_3102 | 0.80 | +0.2 | |
3,721,823 | - | Shewana3_3102 | 0.80 | +0.3 | |
3,721,942 | + | +0.5 | |||
3,721,948 | + | +0.3 | |||
3,722,274 | - | Shewana3_3103 | 0.31 | -0.4 | |
3,722,284 | - | Shewana3_3103 | 0.32 | -3.4 | |
3,722,484 | + | Shewana3_3103 | 0.55 | -1.4 | |
3,722,492 | - | Shewana3_3103 | 0.56 | -1.7 | |
3,722,644 | + | Shewana3_3103 | 0.74 | -1.9 | |
3,722,662 | - | Shewana3_3103 | 0.76 | -0.3 | |
3,722,747 | + | Shewana3_3103 | 0.86 | -1.1 | |
3,722,786 | - | -1.1 | |||
3,722,830 | + | -0.5 | |||
3,722,848 | - | -0.1 |
Or see this region's nucleotide sequence