Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2882

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
3,445,897	-	rdgC	Shewana3_2881	0.17	-2.3
3,446,089	+	rdgC	Shewana3_2881	0.38	-0.1
3,446,120	+	rdgC	Shewana3_2881	0.42	+0.5
3,446,210	-	rdgC	Shewana3_2881	0.52	-0.9
3,446,289	+	rdgC	Shewana3_2881	0.60	+0.8
3,446,289	+	rdgC	Shewana3_2881	0.60	+0.9
3,446,289	+	rdgC	Shewana3_2881	0.60	+0.8
3,446,297	-	rdgC	Shewana3_2881	0.61	+0.4
3,446,413	+	rdgC	Shewana3_2881	0.74	+0.6
3,446,612	+				+0.5
3,446,629	+				+0.2
3,446,637	-				-0.0
3,446,666	+				+0.5
3,446,675	+				-0.1
3,446,675	+				-0.1
3,447,224	-		Shewana3_2882	0.20	+1.4
3,447,380	+		Shewana3_2882	0.28	+2.0
3,447,410	-		Shewana3_2882	0.30	+0.5
3,447,423	-		Shewana3_2882	0.31	+0.3
3,447,430	+		Shewana3_2882	0.31	-1.0
3,447,454	+		Shewana3_2882	0.32	-0.0
3,447,570	-		Shewana3_2882	0.39	+0.5
3,447,575	+		Shewana3_2882	0.39	+1.0
3,447,575	+		Shewana3_2882	0.39	-0.1
3,447,583	-		Shewana3_2882	0.39	-0.5
3,447,616	+		Shewana3_2882	0.41	-0.8
3,447,731	-		Shewana3_2882	0.48	+0.4
3,447,806	-		Shewana3_2882	0.52	+0.9
3,447,860	+		Shewana3_2882	0.55	-0.4
3,447,949	+		Shewana3_2882	0.60	-1.6
3,447,972	+		Shewana3_2882	0.61	+0.0
3,448,038	-		Shewana3_2882	0.65	+0.4
3,448,077	-		Shewana3_2882	0.67	-0.6
3,448,145	+		Shewana3_2882	0.70	-0.7
3,448,342	+		Shewana3_2882	0.81	-0.4
3,448,413	+		Shewana3_2882	0.85	+0.1
3,448,443	+		Shewana3_2882	0.87	-2.0
3,448,558	+				-0.4
3,448,571	-				-0.7
3,448,616	-				-0.4
3,448,810	-				-1.3
3,448,820	-				-0.5
3,449,011	-				-0.4
3,449,014	+				-1.0
3,449,285	-		Shewana3_2883	0.21	+1.0
3,449,666	-		Shewana3_2883	0.39	-2.2
3,449,669	-		Shewana3_2883	0.39	+0.6