Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2880

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
3,443,523	+				+1.8
3,443,536	-				+0.4
3,443,571	-				+1.9
3,443,578	+				+0.7
3,443,578	+				+0.5
3,443,719	-		Shewana3_2879	0.14	-1.3
3,443,778	-		Shewana3_2879	0.22	+0.0
3,443,790	+		Shewana3_2879	0.24	-1.0
3,443,960	-		Shewana3_2879	0.49	-0.4
3,443,962	+		Shewana3_2879	0.49	+1.0
3,443,962	+		Shewana3_2879	0.49	-1.9
3,444,034	+		Shewana3_2879	0.59	+0.4
3,444,042	-		Shewana3_2879	0.60	-0.1
3,444,042	-		Shewana3_2879	0.60	+0.7
3,444,097	+		Shewana3_2879	0.68	+1.0
3,444,175	+		Shewana3_2879	0.80	-1.2
3,444,192	-		Shewana3_2879	0.82	+0.0
3,444,464	+				+0.8
3,444,578	-				+0.6
3,444,598	+		Shewana3_2880	0.10	-0.8
3,444,605	+		Shewana3_2880	0.11	+0.6
3,444,806	-		Shewana3_2880	0.32	+1.2
3,444,907	+		Shewana3_2880	0.43	-0.0
3,444,955	-		Shewana3_2880	0.48	-0.0
3,445,040	-		Shewana3_2880	0.57	+1.2
3,445,054	-		Shewana3_2880	0.59	-0.3
3,445,088	-		Shewana3_2880	0.62	-0.7
3,445,223	+		Shewana3_2880	0.77	-1.7
3,445,229	-		Shewana3_2880	0.77	+0.3
3,445,374	+				+0.4
3,445,676	+				-0.8
3,445,676	+				+0.9
3,445,843	+	rdgC	Shewana3_2881	0.12	-0.1
3,445,843	+	rdgC	Shewana3_2881	0.12	-0.5
3,445,851	-	rdgC	Shewana3_2881	0.12	+0.4
3,445,897	-	rdgC	Shewana3_2881	0.17	-2.3
3,446,089	+	rdgC	Shewana3_2881	0.38	-0.1
3,446,120	+	rdgC	Shewana3_2881	0.42	+0.5
3,446,210	-	rdgC	Shewana3_2881	0.52	-0.9
3,446,289	+	rdgC	Shewana3_2881	0.60	+0.8
3,446,289	+	rdgC	Shewana3_2881	0.60	+0.9
3,446,289	+	rdgC	Shewana3_2881	0.60	+0.8
3,446,297	-	rdgC	Shewana3_2881	0.61	+0.4
3,446,413	+	rdgC	Shewana3_2881	0.74	+0.6