Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2628
Experiment: Chloramphenicol 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,133,964 | - | Shewana3_2627 | 0.78 | -1.4 | |
3,134,069 | - | Shewana3_2627 | 0.81 | -0.6 | |
3,134,125 | + | Shewana3_2627 | 0.83 | +2.0 | |
3,134,368 | + | +1.0 | |||
3,134,518 | + | -0.0 | |||
3,134,952 | - | +0.8 | |||
3,135,226 | - | Shewana3_2628 | 0.29 | +0.9 | |
3,135,375 | - | Shewana3_2628 | 0.42 | -0.4 | |
3,135,661 | + | Shewana3_2628 | 0.65 | +0.4 | |
3,135,676 | - | Shewana3_2628 | 0.66 | +0.9 | |
3,135,698 | - | Shewana3_2628 | 0.68 | +1.4 | |
3,135,713 | - | Shewana3_2628 | 0.69 | +0.6 | |
3,136,170 | + | +0.1 | |||
3,136,246 | - | +0.4 | |||
3,136,586 | - | Shewana3_2629 | 0.12 | -0.1 | |
3,136,825 | - | Shewana3_2629 | 0.21 | +0.7 | |
3,137,018 | - | Shewana3_2629 | 0.29 | -0.3 |
Or see this region's nucleotide sequence