Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2512
Experiment: Chloramphenicol 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,001,251 | + | Shewana3_2510 | 0.69 | +0.1 | |
3,001,259 | - | Shewana3_2510 | 0.70 | +0.8 | |
3,001,284 | - | Shewana3_2510 | 0.74 | +0.8 | |
3,001,329 | + | Shewana3_2510 | 0.80 | +0.6 | |
3,001,465 | + | -0.0 | |||
3,001,648 | - | Shewana3_2511 | 0.28 | +1.5 | |
3,001,833 | - | Shewana3_2511 | 0.81 | +0.9 | |
3,001,855 | + | Shewana3_2511 | 0.87 | -0.3 | |
3,001,910 | + | -0.7 | |||
3,001,952 | - | +1.8 | |||
3,002,156 | - | +1.4 | |||
3,002,190 | + | -0.6 | |||
3,002,537 | - | Shewana3_2512 | 0.36 | -1.0 | |
3,002,876 | - | Shewana3_2512 | 0.75 | -0.3 | |
3,002,881 | - | Shewana3_2512 | 0.76 | -1.9 | |
3,002,889 | - | Shewana3_2512 | 0.77 | -1.2 | |
3,003,166 | + | +1.0 | |||
3,003,208 | + | -0.1 | |||
3,003,237 | + | +1.0 | |||
3,003,391 | + | -2.1 | |||
3,003,394 | + | +1.3 | |||
3,003,402 | - | +2.0 | |||
3,003,404 | + | +2.0 | |||
3,003,404 | + | -1.7 | |||
3,003,404 | + | -0.2 | |||
3,003,416 | + | +1.0 | |||
3,003,431 | - | -0.3 | |||
3,003,960 | - | Shewana3_2513 | 0.82 | -2.1 |
Or see this region's nucleotide sequence