Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2468

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
2,955,198	-				-0.3
2,955,198	-				-0.1
2,955,224	+				-0.3
2,955,339	+				-1.5
2,955,345	+				-0.3
2,955,345	+				-0.5
2,955,345	+				+0.7
2,955,345	+				-0.2
2,955,345	+				+0.2
2,955,347	-				-1.1
2,955,353	-				+1.1
2,955,353	-				-0.9
2,955,353	-				-1.9
2,955,353	-				-0.3
2,955,353	-				-1.1
2,955,353	-				+1.1
2,955,353	-				-1.8
2,955,353	-				+1.1
2,955,355	+				+1.1
2,955,397	+				+0.2
2,955,405	+				-1.3
2,955,411	+				+0.7
2,955,419	-				+2.1
2,955,468	+		Shewana3_2467	0.16	-0.3
2,955,468	+		Shewana3_2467	0.16	-1.3
2,955,485	-		Shewana3_2467	0.26	+0.1
2,955,487	+		Shewana3_2467	0.27	+0.1
2,955,489	+		Shewana3_2467	0.28	-0.3
2,955,579	+		Shewana3_2467	0.77	-2.0
2,955,587	-		Shewana3_2467	0.81	+0.5
2,955,587	-		Shewana3_2467	0.81	+1.1
2,955,587	-		Shewana3_2467	0.81	-0.3
2,955,636	+				-2.2
2,955,636	+				+2.1
2,955,636	+				+0.5
2,955,636	+				+1.1
2,955,644	-				+1.1
2,955,670	-				-0.3
2,955,742	+				+1.1
2,955,772	-				+0.1
2,955,803	-				+0.5
2,955,928	-		Shewana3_2468	0.11	-0.9
2,955,935	+		Shewana3_2468	0.14	+1.1
2,955,943	-		Shewana3_2468	0.17	+0.5
2,955,994	+		Shewana3_2468	0.37	-2.6
2,955,994	+		Shewana3_2468	0.37	-0.3
2,955,999	+		Shewana3_2468	0.39	-0.3
2,956,164	+				-0.3
2,956,296	+		Shewana3_2469	0.15	+2.1
2,956,296	+		Shewana3_2469	0.15	+0.5
2,956,296	+		Shewana3_2469	0.15	-0.5
2,956,304	-		Shewana3_2469	0.16	+0.5
2,956,430	+		Shewana3_2469	0.29	+0.5
2,956,435	+		Shewana3_2469	0.30	-0.3
2,956,459	+		Shewana3_2469	0.32	-1.7
2,956,467	-		Shewana3_2469	0.33	-0.3
2,956,575	-		Shewana3_2469	0.45	-0.7
2,956,687	+		Shewana3_2469	0.57	+2.1
2,956,695	-		Shewana3_2469	0.58	+1.1
2,956,738	+		Shewana3_2469	0.62	+0.5
2,956,757	+		Shewana3_2469	0.64	+0.5
2,957,108	+				-0.5