Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2435

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
2,918,608	+				+0.5
2,918,628	+				+1.1
2,918,636	-				+0.5
2,918,649	-				+2.1
2,918,688	-				-0.7
2,918,819	+				-1.1
2,918,827	-				-0.3
2,918,827	-				+1.1
2,919,094	-		Shewana3_R0102	0.61	+1.8
2,919,094	-		Shewana3_R0102	0.61	+1.4
2,919,094	-		Shewana3_R0102	0.61	+1.6
2,919,094	-		Shewana3_R0102	0.61	+1.2
2,919,096	-		Shewana3_R0102	0.64	+1.2
2,919,104	-		Shewana3_R0102	0.74	-1.1
2,919,244	-				+0.5
2,919,318	+				-0.9
2,919,326	-				-0.7
2,919,344	+				+1.1
2,919,444	-				-1.1
2,919,497	+				-0.5
2,919,604	-				-2.3
2,919,606	+				-1.4
2,919,675	-				+0.5
2,920,042	-		Shewana3_2435	0.26	-0.6
2,920,048	+		Shewana3_2435	0.26	-0.1
2,920,048	-		Shewana3_2435	0.26	+1.7
2,920,096	-		Shewana3_2435	0.28	-0.3
2,920,111	-				+2.1
2,920,136	+		Shewana3_2435	0.30	-0.2
2,920,139	-		Shewana3_2435	0.30	+0.5
2,920,265	-		Shewana3_2435	0.36	+0.5
2,920,349	-		Shewana3_2435	0.40	-1.1
2,920,381	+		Shewana3_2435	0.41	-0.1
2,920,394	-		Shewana3_2435	0.42	+0.6
2,920,506	-		Shewana3_2435	0.47	-0.6
2,920,520	+		Shewana3_2435	0.47	+0.5
2,920,644	+		Shewana3_2435	0.53	+2.1
2,920,661	-		Shewana3_2435	0.54	+1.1
2,920,683	+		Shewana3_2435	0.55	+0.5
2,920,814	+		Shewana3_2435	0.61	+2.1
2,920,861	-		Shewana3_2435	0.63	+0.1
2,921,043	+		Shewana3_2435	0.71	+0.5
2,921,102	+		Shewana3_2435	0.74	-1.4
2,921,304	-		Shewana3_2435	0.83	-0.5
2,921,522	-				-0.2
2,921,530	+				-0.7
2,921,540	-				-0.5
2,921,691	+				-0.8
2,921,871	-		Shewana3_2436	0.14	+0.1
2,921,893	-		Shewana3_2436	0.16	-0.8
2,922,027	-		Shewana3_2436	0.25	-0.2
2,922,029	+		Shewana3_2436	0.25	+2.1
2,922,240	+		Shewana3_2436	0.39	-2.1
2,922,248	-		Shewana3_2436	0.40	-0.7
2,922,286	-		Shewana3_2436	0.43	-0.2
2,922,500	-		Shewana3_2436	0.57	-1.4
2,922,600	-		Shewana3_2436	0.64	-0.4
2,922,663	+		Shewana3_2436	0.68	+2.1