Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2433

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
2,915,369	-		Shewana3_2431	0.83	+1.5
2,915,464	-				-1.4
2,915,571	+				-1.3
2,915,571	+				+0.2
2,915,579	-				+0.3
2,915,579	-				-1.1
2,916,076	-				-0.3
2,916,088	-				-0.7
2,916,169	+				-0.5
2,916,169	+				+2.1
2,916,179	+				+0.2
2,916,179	+				+0.5
2,916,187	-				+0.7
2,916,194	-				-0.8
2,916,209	+				+0.5
2,916,236	+				+2.1
2,916,264	-				+1.1
2,916,305	+				+0.5
2,916,348	+		Shewana3_2433	0.15	+2.1
2,916,358	+		Shewana3_2433	0.17	-1.4
2,916,358	+		Shewana3_2433	0.17	-0.9
2,916,358	+		Shewana3_2433	0.17	-0.5
2,916,365	+		Shewana3_2433	0.18	-0.3
2,916,365	+		Shewana3_2433	0.18	+0.1
2,916,366	-		Shewana3_2433	0.18	+0.7
2,916,366	-		Shewana3_2433	0.18	+1.1
2,916,366	-		Shewana3_2433	0.18	+1.1
2,916,392	-		Shewana3_2433	0.21	+0.5
2,916,436	+		Shewana3_2433	0.28	+2.1
2,916,436	+		Shewana3_2433	0.28	+1.1
2,916,436	+		Shewana3_2433	0.28	+0.7
2,916,444	+		Shewana3_2433	0.29	-0.3
2,916,444	-		Shewana3_2433	0.29	-0.5
2,916,446	+		Shewana3_2433	0.29	+2.1
2,916,446	+		Shewana3_2433	0.29	-1.1
2,916,454	+		Shewana3_2433	0.30	+2.1
2,916,454	+		Shewana3_2433	0.30	-1.4
2,916,454	-		Shewana3_2433	0.30	+1.1
2,916,509	-		Shewana3_2433	0.38	+0.7
2,916,626	+		Shewana3_2433	0.54	-0.3
2,916,652	+		Shewana3_2433	0.57	+0.1
2,916,676	+		Shewana3_2433	0.61	-0.3
2,916,676	+		Shewana3_2433	0.61	-0.4
2,916,676	+		Shewana3_2433	0.61	+2.1
2,916,676	+		Shewana3_2433	0.61	+2.1
2,916,677	+		Shewana3_2433	0.61	-1.1
2,916,683	+		Shewana3_2433	0.62	+0.1
2,916,684	+		Shewana3_2433	0.62	-0.3
2,916,684	-		Shewana3_2433	0.62	+0.1
2,916,684	-		Shewana3_2433	0.62	+0.5
2,916,692	-		Shewana3_2433	0.63	+2.1
2,916,711	-		Shewana3_2433	0.66	+1.1
2,916,750	+		Shewana3_2433	0.71	-1.1
2,916,778	+		Shewana3_2433	0.75	-1.4
2,916,783	+		Shewana3_2433	0.76	-0.5
2,916,783	+		Shewana3_2433	0.76	+0.5
2,916,783	+		Shewana3_2433	0.76	-1.1
2,916,783	+		Shewana3_2433	0.76	+0.1
2,916,786	-		Shewana3_2433	0.76	+1.1
2,916,788	+		Shewana3_2433	0.76	-1.3
2,916,794	-		Shewana3_2433	0.77	+1.1
2,916,801	+		Shewana3_2433	0.78	-1.1
2,916,809	-		Shewana3_2433	0.79	+1.1
2,916,809	-		Shewana3_2433	0.79	+3.1
2,916,814	+		Shewana3_2433	0.80	+0.5
2,916,814	+		Shewana3_2433	0.80	+0.5
2,916,814	+		Shewana3_2433	0.80	+0.5
2,916,852	+		Shewana3_2433	0.85	-0.9
2,916,907	+				-0.3
2,916,937	+				+0.5
2,916,964	+				+0.9
2,917,019	+				+0.2
2,917,033	+				+0.2
2,917,033	+				+1.1
2,917,033	+				+0.4
2,917,033	+				-2.5
2,917,033	+				+1.1
2,917,033	+				-1.6
2,917,033	+				+0.5
2,917,041	-				+1.1
2,917,041	-				-0.1
2,917,041	-				-0.8
2,917,041	-				+1.1
2,917,053	-				+1.1
2,917,054	+				+0.5
2,917,062	-				-0.5
2,917,067	+				-2.5
2,917,075	-				+1.1
2,917,089	-				+0.5
2,917,113	+				-0.9
2,917,114	+				-0.9
2,917,114	+				+0.5
2,917,122	-				-0.5
2,917,122	-				+1.1
2,917,168	+				+0.2
2,917,216	+				+0.5
2,917,222	-				+0.1
2,917,224	-				+0.5
2,917,241	+				+2.1
2,917,241	+				+1.1
2,917,241	+				-0.5
2,917,241	+				+2.1
2,917,241	+				+1.6
2,917,241	+				-0.9
2,917,241	+				+1.1
2,917,241	+				+1.1
2,917,241	+				-1.5
2,917,241	+				+0.1
2,917,241	+				+0.1
2,917,241	+				+0.5
2,917,241	+				+2.1
2,917,241	+				+1.1
2,917,241	+				-1.3
2,917,241	+				+0.1
2,917,249	-				-0.5
2,917,249	-				+1.1
2,917,249	-				+1.1
2,917,249	-				+2.1
2,917,249	-				+1.1
2,917,249	-				+0.1
2,917,249	-				+1.5
2,917,249	-				-1.1
2,917,249	-				+0.5
2,917,251	+				+2.1
2,917,256	-				+2.1
2,917,271	-				-1.3
2,917,271	-				+0.5
2,917,309	+				-0.9
2,917,338	-				+2.1
2,917,347	-				-0.3
2,917,351	+				+0.1
2,917,351	-				+0.5
2,917,351	-				+1.5
2,917,351	-				+0.5
2,917,359	-				+0.5
2,917,364	-				+1.1
2,917,386	+				-0.1
2,917,407	+				+2.1
2,917,412	+				+2.1
2,917,412	+				-0.3
2,917,412	+				-0.3
2,917,415	-				-0.3
2,917,415	-				-2.8
2,917,415	-				+0.1
2,917,428	-				+1.1
2,917,498	+				+2.1
2,917,566	-				+0.1
2,917,626	+				-1.4
2,917,636	+				+0.1
2,917,636	+				+0.1
2,917,636	+				+0.1
2,917,644	-				+2.1
2,917,644	-				+1.5
2,917,644	-				+2.1
2,917,644	-				+2.1
2,917,644	-				+2.1
2,917,644	-				+1.1
2,917,650	-				-0.3
2,917,658	+				-0.5
2,917,658	+				+2.1
2,917,658	+				+2.1
2,917,694	-				+1.1
2,917,695	+				+1.1
2,917,707	+				+2.1
2,917,729	+				-0.5
2,917,729	+				-0.4
2,917,741	+				+2.1
2,917,749	-				+1.1
2,917,872	+		Shewana3_2434	0.12	-0.8
2,917,902	+		Shewana3_2434	0.17	-1.3
2,917,902	+		Shewana3_2434	0.17	+1.1