Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2354

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
2,830,962	-		Shewana3_2353	0.58	+0.2
2,831,074	-		Shewana3_2353	0.63	+0.1
2,831,199	+		Shewana3_2353	0.68	-0.1
2,831,412	-		Shewana3_2353	0.77	+0.6
2,831,476	-		Shewana3_2353	0.80	-0.9
2,831,695	+		Shewana3_2353	0.90	+0.9
2,831,700	+				+0.6
2,831,978	-				-1.9
2,832,062	-				-1.4
2,832,062	-				-0.6
2,832,074	-				+0.6
2,832,238	-		Shewana3_2354	0.11	-0.1
2,832,438	-		Shewana3_2354	0.17	+2.2
2,832,519	+		Shewana3_2354	0.20	+0.7
2,832,549	+		Shewana3_2354	0.21	+0.8
2,832,593	+		Shewana3_2354	0.22	-0.6
2,832,627	+		Shewana3_2354	0.23	-0.1
2,832,750	+		Shewana3_2354	0.27	-0.1
2,832,750	+		Shewana3_2354	0.27	-2.0
2,832,758	-		Shewana3_2354	0.27	+1.7
2,832,824	-		Shewana3_2354	0.30	+0.0
2,832,928	-		Shewana3_2354	0.33	-0.3
2,832,959	+		Shewana3_2354	0.34	+1.9
2,832,959	+		Shewana3_2354	0.34	+1.2
2,832,959	+		Shewana3_2354	0.34	+1.2
2,833,007	-		Shewana3_2354	0.36	-0.1
2,833,065	+		Shewana3_2354	0.37	+0.2
2,833,066	-		Shewana3_2354	0.37	-0.6
2,833,206	-		Shewana3_2354	0.42	-0.1
2,833,225	-		Shewana3_2354	0.43	+0.7
2,833,513	+		Shewana3_2354	0.52	+1.2
2,833,521	-		Shewana3_2354	0.52	+1.7
2,833,696	-		Shewana3_2354	0.58	+2.2
2,833,861	+		Shewana3_2354	0.63	-0.3
2,834,026	+		Shewana3_2354	0.68	+2.2
2,834,034	-				+0.7
2,834,314	+		Shewana3_2354	0.78	-0.3
2,834,322	-		Shewana3_2354	0.78	-0.7
2,834,400	+		Shewana3_2354	0.81	-0.2
2,834,400	-		Shewana3_2354	0.81	-1.1
2,834,501	-		Shewana3_2354	0.84	+0.3
2,834,621	-		Shewana3_2354	0.88	-1.0
2,834,644	-		Shewana3_2354	0.88	+0.2
2,834,692	+				+2.2
2,834,727	+				+1.2
2,835,167	-		Shewana3_2355	0.18	+0.1
2,835,240	-		Shewana3_2355	0.26	-0.1
2,835,713	-		Shewana3_2355	0.80	-1.4
2,835,786	+		Shewana3_2355	0.88	-0.4
2,835,786	+		Shewana3_2355	0.88	+0.6
2,835,789	-		Shewana3_2355	0.89	+1.2
2,835,794	-		Shewana3_2355	0.89	+0.0
2,835,950	-				-0.9