Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2321
Experiment: Chloramphenicol 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,792,903 | - | Shewana3_2320 | 0.14 | -1.6 | |
2,792,913 | - | Shewana3_2320 | 0.17 | -0.3 | |
2,793,055 | - | Shewana3_2320 | 0.47 | +0.7 | |
2,793,072 | + | Shewana3_2320 | 0.51 | +2.2 | |
2,793,215 | - | Shewana3_2320 | 0.82 | -0.3 | |
2,793,327 | - | +0.2 | |||
2,793,349 | - | +0.4 | |||
2,793,473 | - | +1.2 | |||
2,793,717 | - | Shewana3_2321 | 0.36 | +0.0 | |
2,793,723 | + | Shewana3_2321 | 0.37 | -1.8 | |
2,793,765 | + | Shewana3_2321 | 0.42 | -0.4 | |
2,793,928 | - | Shewana3_2321 | 0.62 | -0.1 | |
2,793,990 | - | Shewana3_2321 | 0.69 | +1.2 | |
2,794,043 | + | Shewana3_2321 | 0.76 | +1.6 | |
2,794,306 | + | +0.3 | |||
2,794,851 | - | Shewana3_2322 | 0.54 | +1.1 | |
2,794,937 | - | Shewana3_2322 | 0.64 | -2.3 | |
2,794,977 | - | Shewana3_2322 | 0.69 | +0.3 | |
2,795,109 | - | Shewana3_2322 | 0.84 | +0.5 |
Or see this region's nucleotide sequence