Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2188

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
2,625,315	+		Shewana3_2187	0.41	+1.3
2,625,367	+		Shewana3_2187	0.45	-0.9
2,625,367	+		Shewana3_2187	0.45	+1.3
2,625,375	-		Shewana3_2187	0.45	+0.3
2,625,644	-		Shewana3_2187	0.65	+0.5
2,625,923	+		Shewana3_2187	0.85	+0.7
2,626,060	+				+0.7
2,626,239	+				+2.3
2,626,337	-				+0.1
2,626,734	-		Shewana3_2188	0.20	+0.5
2,626,753	+		Shewana3_2188	0.20	+1.3
2,626,940	-		Shewana3_2188	0.26	+1.3
2,626,981	+		Shewana3_2188	0.28	+0.7
2,626,989	-		Shewana3_2188	0.28	+0.7
2,626,989	-		Shewana3_2188	0.28	+3.9
2,627,065	-		Shewana3_2188	0.31	-0.3
2,627,133	-		Shewana3_2188	0.33	+2.3
2,627,232	-		Shewana3_2188	0.36	+0.7
2,627,375	-		Shewana3_2188	0.41	+1.0
2,627,400	-		Shewana3_2188	0.42	+0.4
2,627,617	+		Shewana3_2188	0.49	+2.3
2,627,625	-		Shewana3_2188	0.49	+1.0
2,627,630	+		Shewana3_2188	0.49	+0.7
2,627,638	-		Shewana3_2188	0.50	+0.6
2,627,638	-		Shewana3_2188	0.50	-1.1
2,627,638	-		Shewana3_2188	0.50	+0.2
2,627,638	-		Shewana3_2188	0.50	+0.5
2,627,766	-		Shewana3_2188	0.54	+1.1
2,627,982	+		Shewana3_2188	0.61	+1.3
2,628,426	-		Shewana3_2188	0.76	+2.3
2,628,447	+		Shewana3_2188	0.77	+0.7
2,628,447	+		Shewana3_2188	0.77	+1.3
2,628,455	-		Shewana3_2188	0.77	+1.2
2,628,593	+		Shewana3_2188	0.81	+0.7
2,628,601	-		Shewana3_2188	0.82	-0.0
2,628,601	-		Shewana3_2188	0.82	+2.1
2,628,634	+		Shewana3_2188	0.83	+2.3
2,628,688	-		Shewana3_2188	0.85	-0.3
2,628,732	+		Shewana3_2188	0.86	+0.7
2,628,811	-		Shewana3_2188	0.89	+0.5
2,628,811	-		Shewana3_2188	0.89	+0.8
2,628,814	-		Shewana3_2188	0.89	+0.7
2,628,855	+				+0.7
2,628,885	+				+2.3
2,629,062	+				+1.3
2,629,153	+				+1.3
2,629,265	-		Shewana3_2189	0.15	-0.3
2,629,283	+		Shewana3_2189	0.17	+2.3
2,629,318	-		Shewana3_2189	0.21	-0.0
2,629,348	+		Shewana3_2189	0.25	-0.1
2,629,356	-		Shewana3_2189	0.26	+0.4
2,629,374	-		Shewana3_2189	0.28	+0.8
2,629,436	+		Shewana3_2189	0.36	+2.3
2,629,534	-		Shewana3_2189	0.48	+2.3
2,629,633	-		Shewana3_2189	0.61	+1.3
2,629,641	+		Shewana3_2189	0.62	+0.4
2,629,641	+		Shewana3_2189	0.62	+0.7
2,629,649	-		Shewana3_2189	0.63	+0.3
2,629,649	-		Shewana3_2189	0.63	+1.0
2,629,649	-		Shewana3_2189	0.63	+1.3
2,629,749	-		Shewana3_2189	0.75	+0.9
2,629,756	-		Shewana3_2189	0.76	+0.3
2,629,758	+		Shewana3_2189	0.76	+0.3
2,630,151	+				+1.2