Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2035

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
2,434,135	+				+0.6
2,434,199	-				+2.3
2,434,216	+				+0.7
2,434,369	+				+2.3
2,434,605	+		Shewana3_2034	0.79	+1.3
2,434,625	+		Shewana3_2034	0.85	+0.3
2,434,625	+		Shewana3_2034	0.85	+0.3
2,434,625	+		Shewana3_2034	0.85	+0.8
2,434,625	+		Shewana3_2034	0.85	-0.5
2,434,625	+		Shewana3_2034	0.85	+0.7
2,434,625	+		Shewana3_2034	0.85	+0.7
2,434,625	+		Shewana3_2034	0.85	-0.8
2,434,625	+		Shewana3_2034	0.85	+0.7
2,434,625	+		Shewana3_2034	0.85	-0.1
2,434,625	+		Shewana3_2034	0.85	+0.3
2,434,625	+		Shewana3_2034	0.85	+0.1
2,434,625	+		Shewana3_2034	0.85	+1.3
2,434,625	+		Shewana3_2034	0.85	+0.5
2,434,625	+		Shewana3_2034	0.85	+0.6
2,434,633	-		Shewana3_2034	0.88	+1.3
2,434,633	-		Shewana3_2034	0.88	+0.7
2,434,633	-		Shewana3_2034	0.88	+2.3
2,434,633	-		Shewana3_2034	0.88	+1.3
2,434,707	+				-0.3
2,434,727	-				+2.3
2,434,746	-				+1.3
2,434,789	+				-0.9
2,434,811	+				+0.7
2,434,819	+				+0.7
2,434,840	-				+2.3
2,434,840	-				+0.7
2,434,864	+				-0.3
2,434,888	-				-0.0
2,435,233	-		Shewana3_2035	0.10	-0.7
2,435,292	+		Shewana3_2035	0.16	-0.0
2,435,343	-		Shewana3_2035	0.20	+0.3
2,435,459	-		Shewana3_2035	0.31	-1.2
2,435,558	+		Shewana3_2035	0.40	+0.3
2,435,680	+		Shewana3_2035	0.51	-0.0
2,435,701	+		Shewana3_2035	0.53	-0.2
2,435,709	-		Shewana3_2035	0.54	+2.3
2,435,743	-		Shewana3_2035	0.57	+0.3
2,435,989	+		Shewana3_2035	0.79	-1.2
2,435,991	+		Shewana3_2035	0.80	+0.3
2,436,105	+				-0.4
2,436,106	-				+2.3
2,436,343	-		Shewana3_2036	0.20	-0.0
2,436,368	-		Shewana3_2036	0.23	+1.3
2,436,707	-		Shewana3_2036	0.75	-0.9
2,436,728	+		Shewana3_2036	0.79	+0.3
2,436,791	+		Shewana3_2036	0.88	-0.2
2,436,794	-		Shewana3_2036	0.89	+1.3
2,437,094	+				+1.3