Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2004

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
2,387,540	+		Shewana3_2002	0.84	+2.3
2,387,679	-				-0.5
2,387,713	-				+1.3
2,387,713	-				+0.7
2,387,781	-				-1.8
2,388,003	+		Shewana3_2003	0.44	+1.3
2,388,390	+		Shewana3_2004	0.10	+1.3
2,388,398	-		Shewana3_2004	0.11	+1.3
2,388,775	+		Shewana3_2004	0.36	+0.2
2,388,822	-		Shewana3_2004	0.39	+2.3
2,389,197	-		Shewana3_2004	0.64	-0.7
2,389,199	+		Shewana3_2004	0.64	+0.7
2,389,372	+		Shewana3_2004	0.76	+1.3
2,389,406	+		Shewana3_2004	0.78	+0.9
2,389,420	-		Shewana3_2004	0.79	+2.3
2,389,615	+				-1.5
2,389,954	+		Shewana3_2005	0.11	-0.0
2,389,996	+		Shewana3_2005	0.13	+0.5
2,390,010	-		Shewana3_2005	0.14	+1.3
2,390,123	+		Shewana3_2005	0.19	-0.0
2,390,258	+		Shewana3_2005	0.26	+0.3
2,390,258	+		Shewana3_2005	0.26	-1.2
2,390,271	+		Shewana3_2005	0.27	-0.3
2,390,297	-		Shewana3_2005	0.28	-0.2
2,390,348	-		Shewana3_2005	0.31	+0.7
2,390,650	-		Shewana3_2005	0.47	+1.3