Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1940

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
2,305,960	-		Shewana3_1938	0.27	+0.9
2,306,164	-		Shewana3_1938	0.47	+0.7
2,306,166	+		Shewana3_1938	0.47	+0.7
2,306,350	-		Shewana3_1938	0.65	-0.7
2,306,457	-		Shewana3_1938	0.75	-1.3
2,306,803	+		Shewana3_1939	0.49	+1.1
2,306,845	+		Shewana3_1939	0.70	-0.7
2,306,853	-		Shewana3_1939	0.74	+0.3
2,306,993	+	thiG	Shewana3_1940	0.11	+0.2
2,307,113	+	thiG	Shewana3_1940	0.27	+1.0
2,307,253	+	thiG	Shewana3_1940	0.45	+2.4
2,307,563	+	thiG	Shewana3_1940	0.86	+1.1
2,307,634	+				+0.5
2,307,634	+				-0.1
2,307,634	+				+0.7
2,307,642	-				+1.3
2,307,765	-				+0.3
2,307,927	-	thiH	Shewana3_1941	0.23	+0.4
2,308,149	+	thiH	Shewana3_1941	0.43	-0.2
2,308,335	-	thiH	Shewana3_1941	0.60	+0.7
2,308,389	-	thiH	Shewana3_1941	0.65	-1.2
2,308,459	-	thiH	Shewana3_1941	0.71	+1.3
2,308,473	-	thiH	Shewana3_1941	0.72	+2.3
2,308,512	+	thiH	Shewana3_1941	0.76	-0.2
2,308,596	-	thiH	Shewana3_1941	0.83	+1.3
2,308,616	-	thiH	Shewana3_1941	0.85	+0.7
2,308,616	-	thiH	Shewana3_1941	0.85	+0.7
2,308,616	-	thiH	Shewana3_1941	0.85	+0.3
2,308,625	-	thiH	Shewana3_1941	0.86	+1.3
2,308,645	+	thiH	Shewana3_1941	0.87	-1.6