Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1879

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
2,224,826	-		Shewana3_1877	0.52	-1.1
2,225,009	-		Shewana3_1877	0.84	+0.6
2,225,183	+		Shewana3_1878	0.11	-0.1
2,225,191	-		Shewana3_1878	0.12	+0.5
2,225,267	+		Shewana3_1878	0.23	-2.9
2,225,288	-		Shewana3_1878	0.27	+0.1
2,225,490	-		Shewana3_1878	0.56	+0.6
2,225,888	+				+0.1
2,225,916	-				-0.9
2,226,013	+		Shewana3_1879	0.12	+1.2
2,226,036	-		Shewana3_1879	0.14	-0.1
2,226,140	-		Shewana3_1879	0.20	-0.6
2,226,223	-		Shewana3_1879	0.25	-0.8
2,226,230	-		Shewana3_1879	0.25	-0.2
2,226,249	+		Shewana3_1879	0.26	-0.1
2,226,257	-		Shewana3_1879	0.27	-0.3
2,226,343	-		Shewana3_1879	0.32	-2.3
2,226,808	+		Shewana3_1879	0.59	+2.2
2,226,845	+		Shewana3_1879	0.61	+0.2
2,227,125	-		Shewana3_1879	0.77	+0.4
2,227,185	-		Shewana3_1879	0.81	+0.4
2,227,198	-		Shewana3_1879	0.82	-0.3
2,227,321	+		Shewana3_1879	0.89	-1.0
2,227,352	+				+0.7
2,227,387	-				+0.7
2,227,397	+				-1.4
2,227,397	+				-1.1
2,227,638	+		Shewana3_1880	0.11	+0.4
2,227,677	-		Shewana3_1880	0.15	+0.2
2,227,682	+		Shewana3_1880	0.15	+1.9
2,227,814	-		Shewana3_1880	0.27	-0.2
2,227,825	+		Shewana3_1880	0.28	-0.1
2,227,876	+		Shewana3_1880	0.32	-0.3
2,228,002	-		Shewana3_1880	0.43	+0.7
2,228,067	-		Shewana3_1880	0.49	+0.2
2,228,168	-		Shewana3_1880	0.58	+0.7
2,228,173	-		Shewana3_1880	0.58	+0.3
2,228,391	+		Shewana3_1880	0.77	-0.8
2,228,418	+		Shewana3_1880	0.80	+0.4
2,228,418	+		Shewana3_1880	0.80	-1.1
2,228,426	-		Shewana3_1880	0.80	+0.8
2,228,426	-		Shewana3_1880	0.80	-0.7
2,228,431	+		Shewana3_1880	0.81	-1.9