Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1792

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
2,119,364	+		Shewana3_1791	0.32	+0.6
2,119,372	+		Shewana3_1791	0.33	+0.9
2,119,544	-		Shewana3_1791	0.46	+2.2
2,119,944	-		Shewana3_1791	0.79	+0.2
2,120,641	+		Shewana3_1792	0.43	-0.1
2,120,699	+		Shewana3_1792	0.50	+0.6
2,120,701	-		Shewana3_1792	0.50	+1.2
2,120,747	+		Shewana3_1792	0.55	-0.6
2,120,747	+		Shewana3_1792	0.55	+0.6
2,120,747	+		Shewana3_1792	0.55	-1.7
2,120,747	+		Shewana3_1792	0.55	+1.6
2,120,753	+		Shewana3_1792	0.56	-1.8
2,120,755	-		Shewana3_1792	0.56	-0.1
2,120,755	-		Shewana3_1792	0.56	-1.1
2,120,755	-		Shewana3_1792	0.56	+2.2
2,120,755	-		Shewana3_1792	0.56	-1.5
2,120,758	+		Shewana3_1792	0.56	+1.2
2,120,761	-		Shewana3_1792	0.57	-1.4
2,120,776	-		Shewana3_1792	0.58	+1.7
2,120,846	+		Shewana3_1792	0.66	+0.7
2,120,848	+		Shewana3_1792	0.67	-2.1
2,120,854	-		Shewana3_1792	0.67	-1.0
2,120,854	-		Shewana3_1792	0.67	+1.2
2,120,854	-		Shewana3_1792	0.67	+0.6
2,120,856	-		Shewana3_1792	0.67	+0.8
2,120,856	-		Shewana3_1792	0.67	+1.5
2,120,866	-		Shewana3_1792	0.69	-1.1
2,120,886	+		Shewana3_1792	0.71	+1.2
2,120,891	+		Shewana3_1792	0.71	+1.2
2,120,895	-		Shewana3_1792	0.72	+1.2
2,120,909	+		Shewana3_1792	0.73	+2.2
2,120,924	-		Shewana3_1792	0.75	-0.1
2,121,016	+		Shewana3_1792	0.85	+0.6
2,121,017	-		Shewana3_1792	0.86	-0.5
2,121,077	-				+2.2
2,121,077	-				-2.1
2,121,077	-				+0.2
2,121,091	+				+1.2
2,121,091	+				+2.2
2,121,091	+				-0.1
2,121,106	-				+1.6
2,121,114	-				-1.0
2,121,114	-				+2.2
2,121,114	-				-0.6
2,121,129	+				+2.2
2,121,130	-				-0.8
2,121,130	-				+1.2
2,121,139	+				+1.6
2,121,147	-				+1.2
2,121,178	+				-0.6
2,121,178	+				+2.2
2,121,191	-				+0.2
2,121,261	+				+0.2
2,121,316	-				+2.2
2,121,372	+				+1.2
2,121,384	+				+0.2
2,121,433	+				-0.6
2,121,456	+				+0.2
2,121,563	+		Shewana3_1793	0.19	+0.0
2,121,567	+		Shewana3_1793	0.19	+0.2
2,121,567	+		Shewana3_1793	0.19	+1.6
2,121,567	+		Shewana3_1793	0.19	+1.2
2,121,567	+		Shewana3_1793	0.19	+1.4
2,121,567	+		Shewana3_1793	0.19	+2.2
2,121,567	+		Shewana3_1793	0.19	+0.6
2,121,567	+		Shewana3_1793	0.19	+1.2
2,121,567	+		Shewana3_1793	0.19	-0.1
2,121,575	-		Shewana3_1793	0.20	+0.6
2,121,575	-		Shewana3_1793	0.20	+0.6
2,121,575	-		Shewana3_1793	0.20	+2.2
2,121,575	-		Shewana3_1793	0.20	-0.1
2,121,631	-		Shewana3_1793	0.26	+0.6
2,121,667	+		Shewana3_1793	0.30	+2.2
2,121,781	+		Shewana3_1793	0.43	+1.2
2,121,784	+		Shewana3_1793	0.43	+2.2
2,121,861	+		Shewana3_1793	0.51	+2.2
2,122,028	+		Shewana3_1793	0.69	-0.4
2,122,036	-		Shewana3_1793	0.70	+2.2
2,122,036	-		Shewana3_1793	0.70	+0.5
2,122,068	+		Shewana3_1793	0.74	+0.2
2,122,095	+		Shewana3_1793	0.77	+1.2
2,122,113	+		Shewana3_1793	0.79	-0.1
2,122,113	+		Shewana3_1793	0.79	+0.6
2,122,121	-		Shewana3_1793	0.80	+2.2
2,122,144	+		Shewana3_1793	0.82	+2.2