Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1657
Experiment: Chloramphenicol 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.0001 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,946,174 | + | +1.4 | |||
| 1,947,614 | + | Shewana3_1657 | 0.41 | +1.1 | |
| 1,947,959 | + | Shewana3_1657 | 0.72 | +1.3 | |
| 1,947,968 | + | Shewana3_1657 | 0.73 | +1.5 | |
| 1,948,700 | + | +0.1 | |||
| 1,948,743 | - | +0.1 | |||
| 1,948,785 | + | Shewana3_1658 | 0.14 | +1.1 | |
| 1,948,952 | + | Shewana3_1658 | 0.29 | +2.1 | |
| 1,949,071 | + | Shewana3_1658 | 0.40 | -0.3 | |
| 1,949,078 | - | Shewana3_1658 | 0.41 | -1.9 | |
| 1,949,150 | - | Shewana3_1658 | 0.48 | +1.1 | |
| 1,949,222 | - | Shewana3_1658 | 0.54 | +0.4 |
Or see this region's nucleotide sequence