Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1620

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
1,906,377	+		Shewana3_1619	0.71	+0.5
1,906,386	+		Shewana3_1619	0.72	+1.1
1,906,397	+		Shewana3_1619	0.72	+0.5
1,906,403	+		Shewana3_1619	0.72	+1.1
1,906,403	+		Shewana3_1619	0.72	+0.5
1,906,403	+		Shewana3_1619	0.72	-0.2
1,906,410	+		Shewana3_1619	0.72	+1.1
1,906,411	-		Shewana3_1619	0.73	+0.1
1,906,411	-		Shewana3_1619	0.73	+2.1
1,906,411	-		Shewana3_1619	0.73	+0.5
1,906,411	-		Shewana3_1619	0.73	+0.5
1,906,524	+		Shewana3_1619	0.77	+1.1
1,906,532	-		Shewana3_1619	0.77	+1.1
1,906,532	-		Shewana3_1619	0.77	+1.1
1,906,575	+		Shewana3_1619	0.78	-0.5
1,906,596	+		Shewana3_1619	0.79	-1.4
1,906,637	+		Shewana3_1619	0.81	+2.1
1,906,645	-		Shewana3_1619	0.81	+2.1
1,906,742	+		Shewana3_1619	0.84	-0.2
1,906,750	-		Shewana3_1619	0.85	+2.1
1,906,753	+		Shewana3_1619	0.85	-0.4
1,906,762	+		Shewana3_1619	0.85	-1.2
1,906,764	+		Shewana3_1619	0.85	+0.1
1,906,772	-		Shewana3_1619	0.85	+0.1
1,906,773	+		Shewana3_1619	0.85	-0.9
1,906,805	-		Shewana3_1619	0.86	+0.5
1,906,847	+		Shewana3_1619	0.88	+1.1
1,906,862	+		Shewana3_1619	0.88	+0.1
1,906,869	-		Shewana3_1619	0.89	+0.1
1,906,896	+		Shewana3_1619	0.90	-0.2
1,906,896	+		Shewana3_1619	0.90	-0.6
1,906,911	+				-1.6
1,906,911	+				-0.5
1,906,911	+				+0.1
1,906,911	+				-1.5
1,906,911	+				+1.1
1,906,918	+				-0.9
1,906,918	+				-1.4
1,906,918	+				+0.1
1,906,926	-				+1.1
1,906,935	+				-1.2
1,906,948	+				-0.5
1,906,958	+				-0.1
1,906,982	+				-2.1
1,907,005	+				+2.1
1,907,012	+				-2.0
1,907,012	+				-1.0
1,907,012	+				+3.1
1,907,081	+				-1.5
1,907,108	+				-0.2
1,907,212	+				-1.1
1,907,325	+				+0.5
1,907,333	-				+0.7
1,907,351	+				+2.1
1,907,359	-				-1.3
1,907,452	+		Shewana3_1620	0.16	+0.1
1,907,457	+		Shewana3_1620	0.16	+2.1
1,907,457	+		Shewana3_1620	0.16	-1.6
1,907,460	-		Shewana3_1620	0.17	-0.9
1,907,465	-		Shewana3_1620	0.17	-0.2
1,907,465	-		Shewana3_1620	0.17	+0.7
1,907,473	-		Shewana3_1620	0.18	+0.6
1,907,491	+		Shewana3_1620	0.20	-1.4
1,907,526	+		Shewana3_1620	0.24	+2.1
1,907,526	+		Shewana3_1620	0.24	+0.1
1,907,544	+		Shewana3_1620	0.26	-0.1
1,907,552	-		Shewana3_1620	0.27	+1.1
1,907,587	+		Shewana3_1620	0.31	+1.1
1,907,648	-		Shewana3_1620	0.37	-1.4
1,907,667	+		Shewana3_1620	0.39	-0.1
1,907,760	+		Shewana3_1620	0.50	+0.5
1,907,823	-		Shewana3_1620	0.57	+0.5
1,907,847	+		Shewana3_1620	0.59	-0.9
1,908,060	+		Shewana3_1620	0.83	+1.7
1,908,065	+		Shewana3_1620	0.83	-0.3
1,908,200	-				-0.7
1,908,321	-		Shewana3_1621	0.13	-0.5
1,908,340	-		Shewana3_1621	0.15	-0.1
1,908,340	-		Shewana3_1621	0.15	+1.1
1,908,584	+		Shewana3_1621	0.45	-1.3
1,908,692	+		Shewana3_1621	0.58	+0.2
1,908,909	+		Shewana3_1621	0.84	+0.1
1,909,142	-				+1.1